Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0732 ATGGCTTCCACTCACATTGTTGTGTCCATTTTTATTGCTCTTATAATGATGGCTTTTATATCCAACACTACTAATGCTGCACGTGCAATGAGGTTGCCGCACTCATCCACGGCGACAACCCTGGCGGCGCGGCTGAAGGTAGGTGGTGAGGCTCCTCCGAATTGCTGGGAGTCATTGTTTGAGCTGCAAGCATGCACCGGTGAGGTCATAACATTCTTCCTCAACGGTGAGACATATTTGGGCCCAAGTTGCTGCCGGGCCATAAGGATCGTGGGCCATGACTGTTGGCCCGGAATGCTTCATTCCCTTGGGTATACTTCACGAGAGGGTGATATTCTGCAAGGTTATTGTGATGCTGAAGAACAACCACATTTCCCACCATCACCAATTACTGTTCCACAAGTGCTTCCTTAG 414 0.4952 MASTHIVVSIFIALIMMAFISNTTNAARAMRLPHSSTATTLAARLKVGGEAPPNCWESLFELQACTGEVITFFLNGETYLGPSCCRAIRIVGHDCWPGMLHSLGYTSREGDILQGYCDAEEQPHFPPSPITVPQVLP* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0732 137 Pfam Prolamin-like 54 118 IPR008502 -
Lja5g0732 137 PANTHER EGG CELL-SECRETED PROTEIN 1.5 1 132 IPR044711 GO:0009567
Lja5g0732 137 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0732 Lja-Chr5 6724144 6724557 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0732 - - lja:Lj5g3v1939460.1 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0732 5 6724144 6724557 Lja5g0732 5 6724144 6724557 ECH