Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0729 ATGTTTTCAAAATTAAAAGCTTGGAAGGCCAACAAAGATGTGATCAAGGAACATAGAGATGCCCCAAAGAGCACCAATATACATGAAGAGTACCACAGGGCAGTAAGGACAAAATCCTATGCTGATTTCTGCAACAAAGCTCAATTACTTGCAAACCATCCTTCAAAAATCAAGAGATTTTCAGAATTCCTCCTTGAACCTGACCAAGAAACCATACCTTCAATTCTTGATTCAGCAACATTTTCAAACACTCCAGAACTCAAAAACATTATGCTCACCTACTTTGACATCAGTGCTGAGGCTTCACATATTTGCAGCAATCTTCTCAAAGGCATTAACCAAGTCCACTCTGATTACCAATTCTTTCAGAGGGCATTAGACATTGATGATGGTGACTCTTTGGAAAGTTTTGAACTAATCATCATTGAGCTAAGCTCATTCATTATCTCAAGTGACCCTTTTTCAAACCTTGAAAACCATGACTTCAAGCTCATCCATGATAAGCACTCATCAGTGTTGCACCATCTGAAGTCAATGAGAAAAAGGGTAGGAAGGAAAATTAAGCATCTAAAGAGGAAAATTGGAGGCTTTAAATTTTCAGGAAGTGGGTCTTCTCTTAGTAAAGTTTATGATCAGCTTGACATAGCAGCCAAGGGAACTTATATAATGAATAGGGACTTTGATACAATGAGTAGGCTTGTAGCTAGGCTTCAAGATGAAATTGAGCATAGCAGGGCAATGGTGCAATTCTGTTTGGACAGGAAAGAGGACAGAGTTTCTATGCAGATTGTGAAAGAGCTTAAGAAAAGTGATTTTGGGTTCAGGAAGCATGTGGAAGAACTTGAAGAGCATGTGTACTTGTGCCTCGTCACAATTAACAGGGCAAGGGCTTTGGTCATTAAGGAAATGAAAAATTCACGTCCATAA 927 0.3883 MFSKLKAWKANKDVIKEHRDAPKSTNIHEEYHRAVRTKSYADFCNKAQLLANHPSKIKRFSEFLLEPDQETIPSILDSATFSNTPELKNIMLTYFDISAEASHICSNLLKGINQVHSDYQFFQRALDIDDGDSLESFELIIIELSSFIISSDPFSNLENHDFKLIHDKHSSVLHHLKSMRKRVGRKIKHLKRKIGGFKFSGSGSSLSKVYDQLDIAAKGTYIMNRDFDTMSRLVARLQDEIEHSRAMVQFCLDRKEDRVSMQIVKELKKSDFGFRKHVEELEEHVYLCLVTINRARALVIKEMKNSRP* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0729 308 PANTHER OS04G0423200 PROTEIN 6 191 - -
Lja5g0729 308 PANTHER OS04G0423200 PROTEIN 192 305 - -
Lja5g0729 308 Pfam Protein of unknown function (DUF677) 55 193 IPR007749 -
Lja5g0729 308 Pfam Protein of unknown function (DUF677) 217 301 IPR007749 -
Lja5g0729 308 PANTHER UPF0496 PROTEIN 3-RELATED 6 191 IPR007749 -
Lja5g0729 308 PANTHER UPF0496 PROTEIN 3-RELATED 192 305 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0729 Lja-Chr5 6701243 6702343 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0729 - - vun:114191405 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0729 5 6701243 6702343 Lja5g0729 5 6701243 6702343 ECH