Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0728 ATGACTGACAAGAGAGGGCTCCCAAGGCATGACCTAATATTGGACAGACTGTCAGAGCATGAAAAGGAACAACTGATAGCTGAGCTAGTGAAGATACAAAATGATGGGACTGTTGAAGTTGATATGGAAAGGAGTGCATCTGTTCCTTCAGAACTGTTAGAGCTCCAATCTTTCGGAGAGCCAACAGTAAGCGGAAGTCTTAGTTCTGCTCTGAAAAGATCAGTTCCACGGTTACAAATTGCCATACTTGTTGTTGGAACTAGAGGGGATGTACAACCTTTTCTGGCCATTGCAAAGAGACTTCAGGAGTATGGTCATCGTGTCAGGCTTGCAACTCATAGTAATTTCAACACATTTGTAAAGTCAGCTGGCATAGATTTCTATCCTCTGGGTGGTGATCCTCGTATATTGGCAGGATATATGGCGAGAAATAAAGGTTTAATCCCTTCTGGTCCGGGTGAAGTATCTATCCAATTAAAGCAGCTGAAAGACATCATTGATTCCCTTCTTCCAGCTTGCACAGCACCTGATTTGGAAACTGGTGTTCCTTTCAGAGCTCAGGCTATTATTGCCAATCCTCCTGCATATGGACATGCACATGTTGCTGAAGCCCTTGGGGTGCCTCTTCACATCTTCTTCACAATGCCATGGACGCCAACCTATGATTTCCCCCACCCATTAGCACGTGTTCCTCAAAGTGCTGGTTACTGGATGTCCTATATAATTGTGGATCTAATGACGTGGTGGGGTATGCGAGGAATTATCAATGACTTTAGGAAAAAGAAATTGAAGCTTCCGCCTATTGCATACTTCAGTATGTACCGTGGATCAATATCTCATTTGCCAACTGGCTATATGTGGAGTCCCCATGTTGTTCCGAAACCCAGTGATTGGGGCCCTTTAGTTGATGTTGTTGGCTACTGTTTCTTGAGCCTTGCATCAAAGTATAAACCTCGGGAAGATTTTGTCCAATGGATTAAAAAAGGACCACCTCCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGAAGATCCCACAAGAACAACAGATGTTATATTGGAGGCACTAAAGGATACAGAACAACGGGGAATTATTGACCGTGGTTGGGGCAATCTAGGGAGTTTGGCTGAAGTTCCTGACAATGTTTTCCTTCTGGAGGAATGCCCTCATGATTGGCTATTTCCTCAATGTTCTGCTGTGGTGCATCATGGTGGAGCTGGAACCACGGCTACAGGATTGAAAGCTGGGTGTCCAACAACCATAGTCCCATTCTTTGGAGATCAATTCTTTTGGGGAGATAGGATACATGAGAAAGAGTTAGGTCCAGCCCCAATTCCAATATCTCAGCTCAATGTTGAGAATTTATCAAATGCCATAAAATTCATGCTCCAGCCAGAGGTGAAATCTCGGGTGATGTTAATTGCTAAGTTGGTCGAGAACGAAGATGGTGTTGCTGCCGCAGTTGATGCATTTCATCGCCATCTACCTGATGAGCTACCACTGCCAACTCCATCTCCACAGGAGGAGGACCAAATTAATCCTTTGCAGTGGTTTTTTCTCCAAATAGGAAAGTGGTGCTGTGCCCCTTGTGGTGGTGTTTAA 1602 0.4444 MTDKRGLPRHDLILDRLSEHEKEQLIAELVKIQNDGTVEVDMERSASVPSELLELQSFGEPTVSGSLSSALKRSVPRLQIAILVVGTRGDVQPFLAIAKRLQEYGHRVRLATHSNFNTFVKSAGIDFYPLGGDPRILAGYMARNKGLIPSGPGEVSIQLKQLKDIIDSLLPACTAPDLETGVPFRAQAIIANPPAYGHAHVAEALGVPLHIFFTMPWTPTYDFPHPLARVPQSAGYWMSYIIVDLMTWWGMRGIINDFRKKKLKLPPIAYFSMYRGSISHLPTGYMWSPHVVPKPSDWGPLVDVVGYCFLSLASKYKPREDFVQWIKKGPPPLYFGFGSMPLEDPTRTTDVILEALKDTEQRGIIDRGWGNLGSLAEVPDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIHEKELGPAPIPISQLNVENLSNAIKFMLQPEVKSRVMLIAKLVENEDGVAAAVDAFHRHLPDELPLPTPSPQEEDQINPLQWFFLQIGKWCCAPCGGV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0728 533 Gene3D Glycogen Phosphorylase B; 80 483 - -
Lja5g0728 533 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 334 477 IPR002213 GO:0008194
Lja5g0728 533 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 1 531 - -
Lja5g0728 533 CDD GT1_Gtf-like 80 494 IPR002213 GO:0008194
Lja5g0728 533 Gene3D Glycogen Phosphorylase B; 309 478 - -
Lja5g0728 533 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80B1 1 531 - -
Lja5g0728 533 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 80 495 - -
Lja5g0728 533 Pfam Glycosyltransferase family 28 N-terminal domain 80 220 IPR004276 GO:0005975|GO:0016758|GO:0030259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0728 Lja-Chr5 6690909 6699807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0728 101 533 Glycosyltransferase AT1G43620 79.405 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0728 K05841 - gmx:100778448 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2776 2 42334991 42357394 Lja5g0728 5 6690909 6699807 PCT