Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0722 ATGCCAGCGACGGACTATCAAGGTTCGTCTCCGTCGTCATCGCTAACTCAGTTTGGCCGTTCAATCTTCAGCACCAACCGTCGTGATCAGGTTCACTCCATGGAAGGTGGTTCAACCTTGGAGCATGAGCTTGAGTCCTTTCAGCAACATGTCACTGATCGGTTCCTTGATCTCTCTTCAGCTGGTCCTGACGATTTGCTCTCGCTTTCTTGGGTTGGGAAGCTTCTTGATCACTTCCTCTCTTGCCAGGAAGAGTTCAAGGCCATTCTCAATGCACACAAGGCACAGGCGTTGAGACCCCCCTTGGATCGAATGGTCGCTGACTATTTCGAACGGAGTGTCAAGGCTTTGGATGTTTGTAATGCAATTCGTGATGGGATTGAGCAGATTCGTCAATGGCAGAAGCTCTTAGAGATTGTGCTCTTTGCATTAGGGGGGAATCAGAGAAGCATTGGTGAGGGTCAATTTCGTAGAGCGAAGAAGGCTCTCATTGATTTGGCAATTGGGATGCTTGATGATAAGGATTCCAATGCTTCTGTTTCGCATCGAAACCGGTCTTTTGGCAAGAGTAGAGACAATCATCAGAGTCAAAATCATAACAATAACAACCATCACCATCGATCTTTGGGGCATTTTCGGTCACTTTCATGGAGTGTTTCTCGTACTTGGTCTGCTGCAAGACAGCTCCAAGCAATTGGGAACAACACGTATCCGCCTCGAGCGAGCGATCTTGTTGCATCTCATGGCCTTGCTATGCCTGTGTTCATCATGAATTCGATCCTGTTGTTTGTGATGTGGGCTCTTGTGGCTGCAATTCCATGCCAGGACCGTGGATTGCACGCGCATTTCACCATTCCGAGGAATTACACATGGGCTGTTCCATTGCTCTCTCTTCATGAGAGGATCTTCGAGGAGTCGAAGAAGCGGGAGCGGAAGAATGCTTGTGGTTTGCTCAAGGAGATTTATCAGATTGAGAAATGTGCTAGGGCCATGAATGAATTGGCTGATTCTGTGCAGTTCCCATTGACAGAGGAGAGGGAAGGGGAAGTTAGGAAGAGAGTGCAGGAGGTTTCACAAGTTTGTGATGCTTTGAAGGATGGACTTGATCCTCTGGAGCGCCAAGTGCGGGAGGTTTTCCATAGAATTGTTCGCAGCCGAACGGAAGGGCTTGACTCTCTTGGAAGGCCAAACAATGCTGAGTAA 1203 0.4838 MPATDYQGSSPSSSLTQFGRSIFSTNRRDQVHSMEGGSTLEHELESFQQHVTDRFLDLSSAGPDDLLSLSWVGKLLDHFLSCQEEFKAILNAHKAQALRPPLDRMVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALIDLAIGMLDDKDSNASVSHRNRSFGKSRDNHQSQNHNNNNHHHRSLGHFRSLSWSVSRTWSAARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAAIPCQDRGLHAHFTIPRNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLTEEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPNNAE* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0722 400 PANTHER BPS1-LIKE PROTEIN 1 398 - -
Lja5g0722 400 Pfam Protein ROH1-like 14 393 IPR008511 -
Lja5g0722 400 MobiDBLite consensus disorder prediction 176 192 - -
Lja5g0722 400 MobiDBLite consensus disorder prediction 176 208 - -
Lja5g0722 400 PANTHER OS04G0688000 PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0722 Lja-Chr5 6660858 6663156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0722 - - gmx:100818059 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0722 5 6660858 6663156 Lja5g0722 5 6660858 6663156 ECH
Lja2g2763 2 42111593 42113410 Lja5g0722 5 6660858 6663156 PCT