Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0716 ATGGATCACAGTGAGGAAGCTCATCGCACTGATCTCATGACCATTACCCGGTTTGTATTGAACGAGCAATCCAAGCACCCTGAGTCTCGCGGTGATTTCTCCATCTTGCTCAGTCACATTGTTCTTGGTTGCAAATTTGTTTGCTCTGCTGTTAGCAAGGCTGGTCTTGCTAAGCTTATTGGACTTGCTGGAGAGACAAATGTTCAGGGTGAAGAGCAAAAGAAACTGGATGTCCTTTCCAATGAGGTCTTTATCAAGGCTTTAGTAAGCAGTGGGAGAACAAGCATCTTGGTGTCTGAAGAAGATGAGGAGGCAACATTTGTGGAGGCTTCTAAGCGTGGAAAGTACTGTGTTGTTTTTGACCCACTGGATGGTTCCTCTAACATTGATTGTGGGGTTTCCATTGGCACTATTTTTGGGATTTATATGGTGAAAGACCAGGAACCAACCATTGGAGATGTGTTGCAACCTGGGAAGAACATGTTGGCAGCTGGTTATTGTATGTATGGAAGCTCATGCACGCTTGTGATAAGTACAGGAAGTGGTGTTAATGGTTTCACCCTTGATCCTTCCCTTGGAGAGTTCATCCTAACTCACCCAGACATCAAGATCCCAAAGAAAGGCAAGATCTATTCAGTGAATGAAGGAAATGCTAAAAACTGGGATGGTCCTACTGCCAAGTATGTGGAGAAATGCAAGTATCCAACAGATGGTTCATCACCAAAGTCGCTAAGATATATTGGAAGCATGGTTGCTGATGTTCACCGCACATTGCTTTATGGAGGTGTCTTTCTGTACCCGGCTGATAAAAAGAGTCCAAATGGGAAACTTCGTGTACTCTATGAAGTCTTCCCCATGTCATTCTTGCTTGAACAGGCAGGAGGACAATCTATCACCGGCAAGCAACGGGCACTTGATTTAGTTCCAACGAAATTGCACGAGCGATCCCCTATATTCCTTGGTAGCTATGATGATGTGGAAGAAATCAAAGCTCTCTATGCTGCAGAGGAAGAAAAGAAATGA 1023 0.4428 MDHSEEAHRTDLMTITRFVLNEQSKHPESRGDFSILLSHIVLGCKFVCSAVSKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALVSSGRTSILVSEEDEEATFVEASKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMVKDQEPTIGDVLQPGKNMLAAGYCMYGSSCTLVISTGSGVNGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKYVEKCKYPTDGSSPKSLRYIGSMVADVHRTLLYGGVFLYPADKKSPNGKLRVLYEVFPMSFLLEQAGGQSITGKQRALDLVPTKLHERSPIFLGSYDDVEEIKALYAAEEEKK* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0716 340 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Lja5g0716 340 SUPERFAMILY Carbohydrate phosphatase 8 333 - -
Lja5g0716 340 ProSitePatterns Fructose-1-6-bisphosphatase active site. 275 287 IPR020548 GO:0005975|GO:0042578
Lja5g0716 340 PIRSF FBPtase 9 338 IPR028343 GO:0042132
Lja5g0716 340 CDD FBPase 20 333 IPR000146 GO:0005975|GO:0016791
Lja5g0716 340 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 204 333 IPR044015 -
Lja5g0716 340 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 200 IPR033391 -
Lja5g0716 340 Gene3D - 203 340 - -
Lja5g0716 340 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 338 - -
Lja5g0716 340 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 335 IPR000146 GO:0005975|GO:0016791
Lja5g0716 340 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 338 IPR000146 GO:0005975|GO:0016791
Lja5g0716 340 Gene3D - 3 202 - -
Lja5g0716 340 PRINTS Fructose-1,6-bisphosphatase signature 154 177 IPR028343 GO:0042132
Lja5g0716 340 PRINTS Fructose-1,6-bisphosphatase signature 211 238 IPR028343 GO:0042132
Lja5g0716 340 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Lja5g0716 340 PRINTS Fructose-1,6-bisphosphatase signature 309 334 IPR028343 GO:0042132
Lja5g0716 340 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Lja5g0716 340 PRINTS Fructose-1,6-bisphosphatase signature 185 208 IPR028343 GO:0042132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0716 Lja-Chr5 6539693 6543732 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0716 K03841 - cpap:110818859 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0716 5 6539693 6543732 Lja5g0716 5 6539693 6543732 ECH
Lja2g2746 2 41425723 41429902 Lja5g0716 5 6539693 6543732 PCT