Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0715 ATGGCGGATCGAGGAGAGGAAGATGACTTGGAAATGGCGATTCGGATGAGCATGCAGGAGAACCCGACGCCGGAGCCGAAGCGGAGCAAGCCGAGGGACGTTGTTGATGGGGTTGTTTCTGGGTCGCCGGAGGATTCGCCGGAGTATAAGACCAGGCGGCGGGAGCTCATGGCGGCGGCTGCTGAGAAGCGGATGGCTGCGACGACCTCTTGGGTTTCGCCTTCGCCGCCGCAATCGCCTGCGGGTAAAGGGGTGATAAAGGGTGCAGAAGCTGGGAAGACTGAGCAGGATTTGCGTTTGAAAGGTGGGGACTTGAGTAAGGTGCTGTCTGTGGATGAAGCTAATCAGTTGTTTGTTATGGTGTTTGGGAGTGAAGTCTCAAAAGGGATTCTTGCTCAATGGAGCAACCAGGGAATCAGGTTTAGCTCTGATCCTGTGACATCAATGGGCCTAGTGCAGCATGAAGGTGGACCCTGTGGCGTTTTGGCAGCTATACAAGCATTTGTGCTCAAATACATTCTTTTCTTCAGTGACGAGTTGAAAGATGTATCACTTATGCCACAGAATCGAGGTCTGGGTGCGTCGTTTAAAAGTCAATCTGTTCCATCATATAATTTTTCTTCACTCTCTGAAGGTGGAAAAGTAAGAGCCCTTGTAAGAAGTATGGGTGAAATTTTATTTTCTTGCGGAAATAATAGAAGGGCTGTGATTGCAACTTTGAGCATTCCAGAAAATGACATTCTGCGCTTTGATGGAATTTCAGAGCATGAGGTCATGGCAAGATCACTCGAAGGTCTTTCCATTGAATCAGCCTCAGATCTGCAGAAAGTTCTTCGGGTTGAAACATACACATCCCAAACAACTTTGTTGCAGAGGCTTGAAGCAGTTATTCCCTTATTCCAAAGTCGTATGGGGGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGGGGACTGGATTTGGTTCAAAGTGACAGGGATGATCCCAGCCTACCACTGGTTACTGCTCCTTTTGGGCATGCCTCCCAGGAAATTGTAAACCTACTGCTCTGTGGGCAGGCTGTCCCTAATGTGTTTGACGGAAGGATGGATTTAGGTGGGGGAATGTTTCTGAAAGGCATATCCCAAAATGTGGAAGTTGGATTTCTCACTTTGCTAGAATCCCTGAATTTCTGCAAGGTTGGTCAGTTTCTGAAATCCCCACAATGGCCTATATGGGTTGTTGGGAGTGAATCCCATTACACAGTGCTGTTTGCTCTTGACCCCAGCGTTCAAAATGAGAATGAACTGGAAGGAAGGGAAACTGAGATTCGCAGAGCTTTTGACGCACAAGATCAGAGTGGAGGCGGTGGTTTCATTAGTGTGGAAGGGTTCCATCATGTTCTCAGAGAAACAAATATCAAACTTCCGTCAGATAAGCTAGATCACCTTTGTGGTGCTGGGTTCATTGTCTGGAGCGAATTCTGGCAAGTAATTTTGGATCTAGACAAAAGCTTGGGAGGTTTGAAGGATTCATCTGGGTTGATGGGTAAGAAGGTCTTTGATCTGTACCATTTTAATGGGATTGCTAAATCAGATCTGAATGGCAGTCAAGTTAATGCTGGGGGTGAAACTCCATTGCAAAGACCCCGGCTCACGAAGTTGAGCGTTTCAGTTCCCCCAAGGTGGACACCGGAGGAATTCATGGCAGATGTGAACGTTTCCTCTGCTTCCGGCCCAAGTGATTCTTCTGGGAAGGACGCTGAAGTATCTAAACCAGAGCCTACTCAGCATGCACCTTTGGTGGACTGCATAAGGACGCGCTGGCCGCGCGCTGTCTGCAGCTGGTTGGGGGATCCTCCTAGTATAGTCTGA 1854 0.4817 MADRGEEDDLEMAIRMSMQENPTPEPKRSKPRDVVDGVVSGSPEDSPEYKTRRRELMAAAAEKRMAATTSWVSPSPPQSPAGKGVIKGAEAGKTEQDLRLKGGDLSKVLSVDEANQLFVMVFGSEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKYILFFSDELKDVSLMPQNRGLGASFKSQSVPSYNFSSLSEGGKVRALVRSMGEILFSCGNNRRAVIATLSIPENDILRFDGISEHEVMARSLEGLSIESASDLQKVLRVETYTSQTTLLQRLEAVIPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGQAVPNVFDGRMDLGGGMFLKGISQNVEVGFLTLLESLNFCKVGQFLKSPQWPIWVVGSESHYTVLFALDPSVQNENELEGRETEIRRAFDAQDQSGGGGFISVEGFHHVLRETNIKLPSDKLDHLCGAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQVNAGGETPLQRPRLTKLSVSVPPRWTPEEFMADVNVSSASGPSDSSGKDAEVSKPEPTQHAPLVDCIRTRWPRAVCSWLGDPPSIV* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0715 617 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 24 IPR003903 -
Lja5g0715 617 MobiDBLite consensus disorder prediction 565 592 - -
Lja5g0715 617 MobiDBLite consensus disorder prediction 1 85 - -
Lja5g0715 617 PANTHER UNCHARACTERIZED 3 616 IPR039785 GO:0004843|GO:0071108|GO:1990380
Lja5g0715 617 SUPERFAMILY EF-hand 433 493 IPR011992 -
Lja5g0715 617 SMART uim 5 24 IPR003903 -
Lja5g0715 617 SMART DUF4205_3 118 494 IPR025257 -
Lja5g0715 617 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 120 431 IPR025257 -
Lja5g0715 617 MobiDBLite consensus disorder prediction 46 60 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0715 K22647 - gmx:100813222 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0715 5 6527908 6537130 Lja5g0715 5 6527908 6537130 ECH