Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0691 ATGATGATGGCTCCCAAAAGGCAAGCATTTTCTTTTATCATTTTGTCCCTCTTGGCATTATCCTTCACATCCATCAACGCTGCCAAAGGTGGGATTGCCGTTTACTGGGGCCAGAATGGTGGTGAAGGCACCTTGAGCACCGCATGTGACACCGGAAACTATGAGATTGTGCTCCTTGCTTTCCTCAACCAGTTCGGCTGCGGCAGAACCCCATCATGGAACTTTGCAGGCCATTGTGGTGACTGGAGTCCCTGTACCAAACTCCAACCTGACATCGAAAACTGCCAACGAAAAGGCGTCAAAGTGTTCCTCTCTATCGGAGGAGCAATTGGACCCTACTCCCTGTGCTCAGAACAAGATGCACACGAAGTAGCCAACTACCTCTATAAAAATTTCCTTAGCGGCCAATATGGGCCGCTAGGAAGTGTCACATTAGACGGCATTGATTTTGACATCGAAGGCGGTACAAACCTCTACTGGGATGCACTTGCAAGGCACCTCGACGCTTTGAGACACAAAAACAAGTACTTCTCCTTGTCCGCCGCCCCGCAATGTTTCATGCCGGATTACTACCTTGACACAGCTATCAAAACTGGCCTTTTTGATTATTTGTTTATTCAGTTCTACAACAACCCTCCATGTCAATATGATACATCTAGAGGTGATGCCACTTTGCTTCTTCAATCATGGGCACATTGGACCTCCTATGTTCACCCGAATAACACGGTGTACATGGGACTACCAGCATCAACCGCTGCGGCTCCAAGTGGCGGTTACATACCGCCGCAAGATCTGATTTCTAAGGTACTTCCTTACATTAAACCAACTCCCAACTATGGAGGAATTATGCTGTGGGACAGGTTCAATGATGTCCAGAATAACTACAGCAATCAGTTTAAGGATCTTGTTCCAAAATCTGTGTTGGGGTTTGTCACGGCGGTTTCGGATGCGGTATCTGAGTTAGTGGCGGAAGCTTTGAAACGCATCTTACCGAAACAATATTAG 1005 0.4716 MMMAPKRQAFSFIILSLLALSFTSINAAKGGIAVYWGQNGGEGTLSTACDTGNYEIVLLAFLNQFGCGRTPSWNFAGHCGDWSPCTKLQPDIENCQRKGVKVFLSIGGAIGPYSLCSEQDAHEVANYLYKNFLSGQYGPLGSVTLDGIDFDIEGGTNLYWDALARHLDALRHKNKYFSLSAAPQCFMPDYYLDTAIKTGLFDYLFIQFYNNPPCQYDTSRGDATLLLQSWAHWTSYVHPNNTVYMGLPASTAAAPSGGYIPPQDLISKVLPYIKPTPNYGGIMLWDRFNDVQNNYSNQFKDLVPKSVLGFVTAVSDAVSELVAEALKRILPKQY* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0691 334 PANTHER III ACIDIC ENDOCHITINASE, PUTATIVE-RELATED 13 300 - -
Lja5g0691 334 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 306 IPR001223 GO:0005975
Lja5g0691 334 SUPERFAMILY (Trans)glycosidases 29 299 IPR017853 -
Lja5g0691 334 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Lja5g0691 334 PANTHER ENDOCHITINASE 13 300 - -
Lja5g0691 334 Gene3D Glycosidases 27 318 - -
Lja5g0691 334 Pfam Glycosyl hydrolases family 18 32 290 IPR001223 GO:0005975
Lja5g0691 334 CDD GH18_hevamine_XipI_class_III 30 301 IPR045321 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0691 Lja-Chr5 6207396 6208729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0691 3 299 Glycoside Hydrolase AT5G24090 46.333 3.38e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0691 K01183 - gmx:547449 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0691 5 6207396 6208729 Lja5g0691 5 6207396 6208729 ECH