LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g0687	ATGGACACGGAAGGGTTATCGTTAATCTGCTCCGGCCTCGGAGTCGCCGCAGAGGACGACGACGGCAATCGAATCGGTTACAACAAGGGCGCACACTGTCTCGATAATCTGAAAGATTTGCTGAGGTTTCTGAGGCGCGACGACCCGCAATCGCGCGATGTGTTTAAGCAAGTCTGCAAATGGAACACCGTTTCCAAGGATTTGATACCCATCATTGAATACTACCATCATGATCGCAATTTGCTTCTCAATTCAGTGAAGATTCTGGTGTTTCTTACTATGCCGATTGAGCCGGGTTCTACCGATATCCCTCAGCAGTTGGATTATCTTTGGGGTTTGAAGTCTGCTGTGACGACTAGTGATGTTGCTGCGGTGATTGTGTCGTTTCTGGAAAGACCACTTGAGAATTTGGAATGTGATGCATTTACAGAAGATGATTGGAAATTGGTACAGCTAGTGCTTACATTTTTTAGAAATATTCTAGCTGTTCAAGAAATTCCGTTGCATCAGAAGTCAGGAGGATTTGCTTCTCAGTTGTTATCAGTGAGAGATAGGTTTCTGGAACTTCTTTTCAGTGATAATGTGATGGATATAATCCTGGTTATATCTCAATATGTTGGTGGTTCTAATGCTTATCTCAGTCAGGATAACTTGCTTCTACTGGAAATTTTCCATTACATTTTTATGGGTCAGGACCCAGAGTTGATAGTTAAGGCCCATTTGAATGGAACTAAGGTTAGCCGTGCTAGTGATGATGAGGCTGATGAAATACATCAAGCCAAGGGCTCCCGAGATTCTCTCCGTCTCCAGTCGATTATAGATGAAGAAAAGAAGAGAAGAACCACTTGTAGGGTTGGCAACATAAGTAGGCATTCACAATTCAGTGGAACATTTACACGGGTTACCACGGATGGTTCCAAGGCAGTATTAAAGGGAAATCCTAATTCTTCTCATAATGTGCTGCTTAAATCACAAAATGTAACTCGGGGTCCTGCCAAAAAAATTGCATGGGATCATTCAAACTTGCCATCAACAAACGAAAAGATATTGAAATTGCTTCATGGGTTTGTGAATCAGTTTCTTTCTGGGGGATACAATGTTTTGATGCGATCCATCCGAGAAGATATTGAAAAGGAACATCCTGCAATTCAAAAAAGTGATGTTGTTGTTTTCTTTCAAGTGGCTGCATTTGTCACTTCATTTCAGTTTCACAAGTATTCATCTTCTAAGAACAAGGAGGGAGGGGACACATTTGAGACTTTTAGTGATAAAGATGCTGATACCTCAGATTTCAGTGGTCAAATATGTGGCCCAATTGCAGCATCCCTGAATGAGTCAATGTTTCAGTTAGTCATTTCAAAGTGGCGGCATGCCTATGATGGTCTAAAGGAGACAAATGACTACAAGTTTCTATCTGCAGCTAGTTCTCTTTTGAAAAACATGATTCGCATGCTGGATTTGGTACTAAAATTGTTGCCAGAAGACTCTAAGGAGCCACAAACAGCTCGTATACTTCTGTACAAGTTATTTTATGATCAAACTGAGGAAGGGATGACTCAGTTCCTCTTGAATTTGATGAAAACGTTTGATATTCACAAACAATGCAAAAGTGATCTTGCAGATTTGGTAGAAATCATTCACAAGGTTGTAAAGTTAATGGACAATCTTCAATCTCGTGGTACATTAAGGGTATCAAGGAAATCAAGGAAAGTGAAAAAGAAGAAATCTTCTGAAGGAACAGAATCAGGGAATAAACCAACTGGAGATAATTCTTGCATTGGAAATGAAGCTGGCATCCCTATTGGCAACCAATTACCTGAAAATCAGTCACTGCAAAAGGAAAACCTTCCGAGTGCAAATTCCACTGGGGAAGACTGTGTTATCCCTAATGATAATGAACATCAAAATATTGTTGAAAATGGGGACTCCCAAGTTGGTTCAGAACCAGTGCAAAACACAAATCCTGAACATTGTATTGAGGATATGTTGGATGATACTGGTGATTTTTCTGAAGATGAGCAATTTAATGCAATTAGTGAAGTTGATTTCAATGTTTCAACGCTCGTCTCTGCCTTTGTAAATCACAACATTATTCAGAAATTATGTTGGTTGCTCAAGTTTTATAAGAGCAATTCTCTTGCTATAAATTATTACATAATAGGCATGTTGCGGAGAATAAGTGATGATCTTGAGCTGCATCCAATGCTCTATCAGTTGTCACTGCTCACGACTTTTTATGACATCCTGGTTGAACAAAAGTCATGTCCCTGCAAGGAATATACAGAAATTGTTGATTTCCTGACCAGTTTGGTTAGAAAGATGCTAAAGAAAATGAAAAAGCAACCCCTCCTGTTTGTGGAAGTCCTTTTCTGGAAGACCCGAAGGGAATGCCACTACATCAATGCAGAATATTTGTTGGATGAGCTTGGTCATTTGAAGAAAAAACATATAAATGGGAACGATGCTCAAGGAGATGGAGAAATTGGCTCATCCCCGGTAAATGTGTGGACTCGTAGAAGCATAGCTGATGCACTTGGTGATGATGAAGCTGATGTTGTGATCTCTCATGATTCAGGGTATCAAAACCATGAAGAAAATATTGATGATGTAATAGAAGGCCTTGCATCCACCTCAGGCCAAGATGATATTAATGGGGAGCAATTGGCGGCTGATGAATCTCAAATAGCTCCAAGGAGAAAGAAAAAACTTATTTTAAATGCTGAATTGGAGAGAGAAATTAAGGATCTCTACGAAAGATTCAAAGATGAACGAAATTGCAGTCGATGTATTGCTGAAGTGCTAGATCCAGATGGTAAAATTTCACCGGCTCAAATTTCCAACACATTAAAAAAATTAGGGCTAAGAGTTTCACCTAGGCAAAAGATTGGTGATGCGGAGAAACCTTCTTCAACAAGCCGTAATCAATTAGAGGGTGGTGATGGAACAGGAGTTGATGATCATAAATCAGTGAACTTGGAGGGAAGCCTGTCAGTGCAGCATCTGCAGAAAAGAAAGAGAGTTCGTGCTTTCAATGAAGATCAGGAAGCTATGATCAAAGTTCTGTATGAGCAATTCAAGGACCATAGAAGATGTAGTTACATGATAGCCAATGCACTAGATGTGGATGGTAAATTTACACCTGCCCAAGTCTCTCGAAAACTTAAGCAGCTTGGTTTATTTGTTCCTAAGAAGAGTTCTAAAGGCAAAATGCACCCAAATAGTGAGGATCTTATGGAGTGTTCTGAAGATAGAATAAATGAATCTGATGACGAGACATTGATATCATTGATAGAAAGGAAAAAGGTGAATAGCAAAGGATCAAGTGAACAGTTACCTGAACAGACCAGTGAGGATAGATTGTCAAAAGATGTTTCTGATGATGAACTACTGAGCTCTGTTCTCAAGAAAAAAATGAAGAGTAGAGTATCAAGTGAACAATTCCAGGAACACATCAATGAGGATAAGTTGACAAGAGATGATTCTGATGATGAAATGCTCAGCTCTGCGCTCAAGAGAACTAGGAGATCTGTTCTTAAATCAAAGCATGATGAGCTGGAAACCATCCAAATTCAGGACAGAATAATGGACAGTGATTCTTATGATGATGACATGAAAGAGGTTTCAGAAAGTGTCACCAGGAGTGAAAAACGGATAGGTTTCATGAACTCCCAACAAGTTGAATATCAACAAGTGGATGAAGGCTTGGTAGATTCAGAGGATGAAGTGGCTGCTAGTGCAGCTCCTGACAATGCTGTGTCCAGAAGGAAGCTGAGAATGGTAATTGATGCTGAGGATGATGACTAA	3804	0.3985	MDTEGLSLICSGLGVAAEDDDGNRIGYNKGAHCLDNLKDLLRFLRRDDPQSRDVFKQVCKWNTVSKDLIPIIEYYHHDRNLLLNSVKILVFLTMPIEPGSTDIPQQLDYLWGLKSAVTTSDVAAVIVSFLERPLENLECDAFTEDDWKLVQLVLTFFRNILAVQEIPLHQKSGGFASQLLSVRDRFLELLFSDNVMDIILVISQYVGGSNAYLSQDNLLLLEIFHYIFMGQDPELIVKAHLNGTKVSRASDDEADEIHQAKGSRDSLRLQSIIDEEKKRRTTCRVGNISRHSQFSGTFTRVTTDGSKAVLKGNPNSSHNVLLKSQNVTRGPAKKIAWDHSNLPSTNEKILKLLHGFVNQFLSGGYNVLMRSIREDIEKEHPAIQKSDVVVFFQVAAFVTSFQFHKYSSSKNKEGGDTFETFSDKDADTSDFSGQICGPIAASLNESMFQLVISKWRHAYDGLKETNDYKFLSAASSLLKNMIRMLDLVLKLLPEDSKEPQTARILLYKLFYDQTEEGMTQFLLNLMKTFDIHKQCKSDLADLVEIIHKVVKLMDNLQSRGTLRVSRKSRKVKKKKSSEGTESGNKPTGDNSCIGNEAGIPIGNQLPENQSLQKENLPSANSTGEDCVIPNDNEHQNIVENGDSQVGSEPVQNTNPEHCIEDMLDDTGDFSEDEQFNAISEVDFNVSTLVSAFVNHNIIQKLCWLLKFYKSNSLAINYYIIGMLRRISDDLELHPMLYQLSLLTTFYDILVEQKSCPCKEYTEIVDFLTSLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYLLDELGHLKKKHINGNDAQGDGEIGSSPVNVWTRRSIADALGDDEADVVISHDSGYQNHEENIDDVIEGLASTSGQDDINGEQLAADESQIAPRRKKKLILNAELEREIKDLYERFKDERNCSRCIAEVLDPDGKISPAQISNTLKKLGLRVSPRQKIGDAEKPSSTSRNQLEGGDGTGVDDHKSVNLEGSLSVQHLQKRKRVRAFNEDQEAMIKVLYEQFKDHRRCSYMIANALDVDGKFTPAQVSRKLKQLGLFVPKKSSKGKMHPNSEDLMECSEDRINESDDETLISLIERKKVNSKGSSEQLPEQTSEDRLSKDVSDDELLSSVLKKKMKSRVSSEQFQEHINEDKLTRDDSDDEMLSSALKRTRRSVLKSKHDELETIQIQDRIMDSDSYDDDMKEVSESVTRSEKRIGFMNSQQVEYQQVDEGLVDSEDEVAASAAPDNAVSRRKLRMVIDAEDDD*	1268

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g0687	1267	Pfam	Timeless protein	27	299	IPR006906	-
	Lja5g0687	1267	Coils	Coil	899	926	-	-
	Lja5g0687	1267	MobiDBLite	consensus disorder prediction	563	605	-	-
	Lja5g0687	1267	MobiDBLite	consensus disorder prediction	956	995	-	-
	Lja5g0687	1267	MobiDBLite	consensus disorder prediction	1097	1124	-	-
	Lja5g0687	1267	PANTHER	PROTEIN TIMELESS HOMOLOG	1	1216	-	-
	Lja5g0687	1267	MobiDBLite	consensus disorder prediction	964	978	-	-
	Lja5g0687	1267	MobiDBLite	consensus disorder prediction	1141	1163	-	-
	Lja5g0687	1267	PANTHER	TIMEOUT/TIMELESS-2	1	1216	IPR044998	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja5g0687	K03155		-	gmx:100796385	1788.08

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja5g0687	5	6175691	6189474	Lja5g0687	5	6175691	6189474	ECH