Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0679 ATGGCGTCAGGGGAACCAGAATCGTTCGTCGACAAGATTGAAGAAAAGTTTCACGACAACAACTCCGATTCCGATTCGTATTCTGATTCCGACGACGATCACAACAAGAAGAAGAAGCCACCGGTTCCGTCCTCCAAACCCAATGTCTACCGCCTCTTCGGCCGCGATCGCCCCGTTCACAAGGTCTTAGGCGCTGGAAAACCTGCTGATATTCTGCTATGGAGGAGCAAGAGAAGTACAGCAACTGTACTCGGTGCCGGCACTGCCTTGTGGATTTTCTTTGAGTTGCTGGAATATCACCTCATAACTTTTGTTTGCCATTTATCCATTTTGTCTCTGGCTGGCCTGTTCTTGTGGTCCAATGCATCTGTTTTTATCCACAAGTCTCCACTGCACATCCCGCATATTGCGATTCCTGAGGATTGTGCGCTTCAGGTTGCTTCTGCTATAAGAGTTGAAATTAACCAAGCCTTTGTTGTTTTGCGGCAGATCGGAACTGGAAGAGATATAAAGAAGTTCCTTAGCGTTATTGGTATCCTGTGGGTTGTCTCAGTTGTTGGCAATTGGTTCAACTTCTTGACCTTGTTTTACATATTCTTTGTGTCACTGTTCACATTGCCACTGATATATGAGAAATACGAAGACCAGGTTGATGCACTAGCTGAGAAGGCAATGATTGAGATCAAGAAGCAGTATGCAGTTCTTGACGCTAAGGTTTTGAGCCAGATACCGATACCGGGGTTGAAAAAGGATTAG 756 0.4563 MASGEPESFVDKIEEKFHDNNSDSDSYSDSDDDHNKKKKPPVPSSKPNVYRLFGRDRPVHKVLGAGKPADILLWRSKRSTATVLGAGTALWIFFELLEYHLITFVCHLSILSLAGLFLWSNASVFIHKSPLHIPHIAIPEDCALQVASAIRVEINQAFVVLRQIGTGRDIKKFLSVIGILWVVSVVGNWFNFLTLFYIFFVSLFTLPLIYEKYEDQVDALAEKAMIEIKKQYAVLDAKVLSQIPIPGLKKD* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0679 251 PANTHER RETICULON-LIKE PROTEIN 3 249 - -
Lja5g0679 251 MobiDBLite consensus disorder prediction 8 40 - -
Lja5g0679 251 MobiDBLite consensus disorder prediction 1 49 - -
Lja5g0679 251 Pfam Reticulon 69 224 IPR003388 -
Lja5g0679 251 ProSiteProfiles Reticulon domain profile. 68 251 IPR003388 -
Lja5g0679 251 PANTHER RETICULON 3 249 IPR045064 GO:0009617
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0679 Lja-Chr5 6104078 6106719 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1835 3 20856326 20858610 Lja5g0679 5 6104078 6106719 ECH
Lja4g0375 4 3002388 3005183 Lja5g0679 5 6104078 6106719 ECH
Lja5g0679 5 6104078 6106719 Lja5g0679 5 6104078 6106719 ECH