Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0375 ATGGCTGACCACAGCGAGCACGATGAACCCAAGGCTGAGTCTCTGATGGAGAAGATTGCAGAGAAGATCCATGGCCATGACTCGTCTTCTTCGTCTGATTCTGACAACGAGAAAGAGAAAGAGAAAAGCAGCTCCTCTCCTTCTTCCGATTTCAAGTCCAAGGTTTCCAGGCTCTTCGGCAGGGAGAAGCCCATTCACCATGTTCTCGGTGGCGGAAAACAGGCTGATGTTTTCCTGTGGAGAAATAAGAAGATATCAGGGACGGTGCTCGGAGTTGCAACAGTTGTATGGATTCTGTTTGAATTGCTTGAATACCACCTCCTCACTTTGATCTGCCACCTGGCGATACTTGCACTGACTCTATTGTTCTTATGGTCTAATGGATCCTCTTTGATCAACAAGAGTCCGCCAAAGATCCCACAAGTGCACATTCCTGAGGAGCCTGTTTTACAGTTGGCCTCTGCTCTTAGAGCTGATATCAATCGGGCTTTTGCTGTACTAAGGGATATTGCATCCGGCAAGGATCTCAAGAAGTTCCTCTCAGTCATTGCCGGATTATGGGTTTTCTCTGTTGTTGGGAGTTGGACCAACTTCTTGACATTGTTCTACATAGCTTTTGTTCTGCTCCACACTGTACCTGTGCTCTATGAGAAATATGAAGATCAGGTGGACTCTATCGGTGAGAAGGCACTTCACGAGTTTAAGAAGCAGTATGCAGTGTTTGATGCCAAAGTTTTGAGCAAGATTCCCAAAGGTCCTTTGAAAGATAAAAAGAATGCTTGA 783 0.4585 MADHSEHDEPKAESLMEKIAEKIHGHDSSSSSDSDNEKEKEKSSSSPSSDFKSKVSRLFGREKPIHHVLGGGKQADVFLWRNKKISGTVLGVATVVWILFELLEYHLLTLICHLAILALTLLFLWSNGSSLINKSPPKIPQVHIPEEPVLQLASALRADINRAFAVLRDIASGKDLKKFLSVIAGLWVFSVVGSWTNFLTLFYIAFVLLHTVPVLYEKYEDQVDSIGEKALHEFKKQYAVFDAKVLSKIPKGPLKDKKNA* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0375 260 ProSiteProfiles Reticulon domain profile. 74 260 IPR003388 -
Lja4g0375 260 PANTHER RETICULON 1 258 IPR045064 GO:0009617
Lja4g0375 260 PANTHER RETICULON-LIKE PROTEIN 1 258 - -
Lja4g0375 260 MobiDBLite consensus disorder prediction 1 47 - -
Lja4g0375 260 MobiDBLite consensus disorder prediction 1 53 - -
Lja4g0375 260 Pfam Reticulon 75 229 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0375 Lja-Chr4 3002388 3005183 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0375 - - gmx:100779587 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0375 4 3002388 3005183 Lja4g0375 4 3002388 3005183 ECH
Lja4g0375 4 3002388 3005183 Lja5g0679 5 6104078 6106719 ECH