Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0662 ATGAGGAGCCTGCGCACATTCCTAAGGACCATGTTTCTTTTGGTATTTCTTGGGTGGCTCACCATTTGGATCTTGTTGCCCACAAAGATCTACAAGAACACATGGACTCCCAAGCTTCAAAGCAACCTAAATTCCACTTACTTTAGAGAGCAAGGGACAAATCTCCTGCTTTTCACATTCCCCATTATGTTCATTGGGGCTTTGAGTTGCATCTATCTCCATCTTCATCAGAAAAGAACACAAAAATCATACACAAGTGAAGATGTAAATAGATATCTATGTTCCTTGAGACGTCCATTGCTAGTGATGTCTCCGATAGGGGTTGTCACATCTATGGAGCTTATTTTTGTAGCCATGTTTGGTGTGCTCTTGATATGGTCCCTCTCCAATTACTTACAAACCAGCTTTTCCCACCTTCATATGCACATGGAAGGAGAAAAAGTGTGGGAAGCAAAGTTCAGGAGTGTATCTCTGAGACTTGGGTACATAGGAAACATATGTTGGGCGTTTCTATTTTTTCCAGTCACAAGAGGATCTTCTATTTTGCCTCTTGTTGGACTCACTTCTGAATCAAGCATCAAGTACCATACCTGGCTTGGTCATACATCAATGGTTCTTTTTGCTGCGCATACTATAGGTTTCATCATCTATTGGGGCATCACAAACCAAATGAAAGAGATGCTAGAATGGAGCAAGACATATGTATCCAATGTAGCAGGGGAGATTGCAAGTTTAATTGCTTTAGCCATGTGGGTGACAAGTTTTCCCCGGGTTAGGCGTAAGATGTTTGAGGTGTTCTTCTACACTCACCATCTCTACATTCTCTACATCTTATTTTATGCCATCCATGTTGGAGTTGCATACATGTGCATGATAGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACACCTCAGATTCTTACAATCTCGCCAACATGCTCGGTTACTATCAGCTCGCCTCTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGACCCCAAGTTTACGCTATAACCCCACGAGCATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGCTCTAACATGGAGACAAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAGCTGGTCAAACAAGCTGTACCAGGAACTTTCTAATTCTTCTTTGGATCATCTCAACGTTTCTGTTGAAGGGCCATATGGACCGCATACTGCACAATTTTTAAGGCACGATGAACTAGTGATGGTGAGTGGTGGAAGTGGCATCACACCCTTCATATCCATAATCCGAGATCTCATATTCCAAAGCCAACAACAAGAATCTCACACTCCAAAACTCCTCCTTGTTTGTGCTTTCAAGCATTATGCTGATCTAACCATGTTAGATCTTGTGCTTCCTGTTTCTGGCTCAACAACTGAAATCTCACAGCTTCAGTTACAAATTGAAGCCTATATTACAAGAGATAAAGAAGAACCCCCAAGAGATTCTCAAAAACAAATCCAAACCATTTGCTTTAAGCCCTCCTTCTCAGACTCTCCAATCTCAGCTGTATTAGGCCCCAACAACTGGTTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGATTGTCACTCGTTTTTATATTTACCCAATTGAAAATAACTCAGATGAAGTTTATGACTGGAGCTTCAAGGTTTTGTGGTTCCTGTTTCTACTCTGTGCATGCATATGTATCTGTTCTAGTGCAATTTTTCTATGGTGGAAGAAACAAAACGTTGTTGAAATTAATAAGCAGATTATGAATGTAGAACTTTTTACACCAGAAAGATCACCAGGTTCATGGATTTATGGCTCGGAAAGAGAGCTGGAAAGCCTTCCTCATCAATCTTTAGTGCAAGCCACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGTTTGAGCGCAAAGGAAAAGATGTTGGAGTCCTTGTTTGTGGCCCTAGAAACCTGAGACATGAAGTTGCCAGAATTTGTTCTTCGGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTCAATTGGTGA 2100 0.4143 MRSLRTFLRTMFLLVFLGWLTIWILLPTKIYKNTWTPKLQSNLNSTYFREQGTNLLLFTFPIMFIGALSCIYLHLHQKRTQKSYTSEDVNRYLCSLRRPLLVMSPIGVVTSMELIFVAMFGVLLIWSLSNYLQTSFSHLHMHMEGEKVWEAKFRSVSLRLGYIGNICWAFLFFPVTRGSSILPLVGLTSESSIKYHTWLGHTSMVLFAAHTIGFIIYWGITNQMKEMLEWSKTYVSNVAGEIASLIALAMWVTSFPRVRRKMFEVFFYTHHLYILYILFYAIHVGVAYMCMIAPGIFLFLVDRHLRFLQSRQHARLLSARLLPCDALELNFSKTPSLRYNPTSIVFINVPKVSKLQWHPFTVTSSSNMETNCLSVAIKNVGSWSNKLYQELSNSSLDHLNVSVEGPYGPHTAQFLRHDELVMVSGGSGITPFISIIRDLIFQSQQQESHTPKLLLVCAFKHYADLTMLDLVLPVSGSTTEISQLQLQIEAYITRDKEEPPRDSQKQIQTICFKPSFSDSPISAVLGPNNWLWLGAIISSSFLMFLLLLGIVTRFYIYPIENNSDEVYDWSFKVLWFLFLLCACICICSSAIFLWWKKQNVVEINKQIMNVELFTPERSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFERKGKDVGVLVCGPRNLRHEVARICSSGLADNLHFESISFNW* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0662 699 Pfam Ferric reductase NAD binding domain 417 683 IPR013121 GO:0016491
Lja5g0662 699 SFLD Ferric Reductase Domain 27 699 - -
Lja5g0662 699 CDD NOX_Duox_like_FAD_NADP 316 494 - -
Lja5g0662 699 Pfam Ferric reductase like transmembrane component 161 279 IPR013130 -
Lja5g0662 699 PANTHER FERRIC REDUCTION OXIDASE 4-RELATED 7 698 - -
Lja5g0662 699 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 309 413 IPR017927 GO:0016491
Lja5g0662 699 Gene3D - 596 698 IPR039261 -
Lja5g0662 699 Gene3D - 401 526 IPR039261 -
Lja5g0662 699 SFLD Ferric reductase subgroup (FRE) 11 699 - -
Lja5g0662 699 Pfam FAD-binding domain 315 410 IPR013112 GO:0016491
Lja5g0662 699 SUPERFAMILY Riboflavin synthase domain-like 307 391 IPR017938 -
Lja5g0662 699 PRINTS Cytochrome B-245 heavy chain signature 615 633 IPR000778 GO:0016020|GO:0016491
Lja5g0662 699 PRINTS Cytochrome B-245 heavy chain signature 238 261 IPR000778 GO:0016020|GO:0016491
Lja5g0662 699 PRINTS Cytochrome B-245 heavy chain signature 263 283 IPR000778 GO:0016020|GO:0016491
Lja5g0662 699 PANTHER NADPH OXIDASE 7 698 - -
Lja5g0662 699 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 401 471 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0662 Lja-Chr5 5973505 5978126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0662 1 699 Miscellaneous Gene Families AT5G23980 58.865 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0662 K00521 - gmx:112998154 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0662 5 5973505 5978126 Lja5g0662 5 5973505 5978126 ECH