Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0659 ATGGAAGCACCGCTTTTGACCAAAACTTCAACCTCAGATTCTGACTATTTGGCCGTGAAGAGCTTGAAGGAGGCTAACTCAATTTTCTGGTCAGAAACAGTGGTGCTATGGAAAATAGCAGTACCAGCTGCACTAACCGCACTGTTTCAATTCTTGTTAAACTCTTCCACCACCATCTATGCTGGTCATTTAGGAGACGCTGAGCTCTCTTCCATCTCTCTCTATTCCAGTGTCATGTGTGCCATCTGCTTTGCTTTGATTTTTGGGATGTCTGCTGGGCTGGGAACGCTTTGCGGGCAAGCTTATGGAGCAGGGAAAGTTCAATCTCTTGGAATTTACCTGCAAAGGTCATGGATTGTTGCACTCATCCTTGTTATAATTCTCTTGCCTCTCTATGTATATGCCACTCCATTCTTAAAACTACTAGGCCAAGAAAATGACATAGCTGAACTGGCTGGCCACTATTCAATACTATCCATTCCCTATTTGTTTTCCTACACCATCAATTATCCCACCCAGAGATTCCTTCAGGTCCAGAGTAAGGTTAATGTGATCATGTTCATAGCATTTATAGCCTTAGTTATACACAATGTGCTTCTTTACCTTTTCATCTATGTCCTCTCCTGGGGTATAACCGGGGCAGCTATGGCTTCTAACCTCTCATCGTGGGTGGTTGCTGGGGGTCAAGTTATCTATGCTGTGGGTTGGTGTAAGGAAGCGTGGACCGGGTTGTCATGGCTAGCTTTCAAGGATCTATGGGGCTTTGCGAGGCTAGCTATTGCCTCATCTCTAATGATGTGCTTTGAGCAATTTTACAACCCTTGCATTATACTCCTCGCTGGTCTACTTGACAATCCTGTAATTGCTGTTGGTTCATATTCTATCTGCCTGAACTTCGCAGGTTGGCAAATGATGCTGCTAATTGGAGTGAATATTGCTGTTAGTGTTCGGATCTCCAATAAGATAGGAATGCAGCATCCGAGAGCTGCTAAGTACTCTTTCTTGGTGACTATGTTCCACTCTCTCCTCTTAGGGATGGTGTGCATGATTGCTATTTTCTTAAGTAGAGACAATCTTGCTATTATCTTCTCAAACAGTAGGAATATGCAATTAGCTGTGGCTGAACTAGCATACCTTCTAGGTCTATCGATGCTTATAAATAGTGCTTCACAAGTGTTGTCAGGTGTTGCCATTGGAAGTGGATGGCAAGTGAAGGTAGCTTACATTAACTTAACCTGCTATTATGTGGTTGGTATCCCCCTTGGACTTTTACTCGGTTTCACGGCCAAAGCAGGGGTCAAGGGTCTATGGGGAGGCACACTGTGTGGCAGTATCCTTCAGGTGTTGTGCCTTTTATCTGTAATTTGGAAGACCAATTGGACCAAAGAGGTGGAGCAAACAGCGAAGCGTATGCAAGGCTCTCAGTTGGACCCGGTTAAGCCATAA 1446 0.444 MEAPLLTKTSTSDSDYLAVKSLKEANSIFWSETVVLWKIAVPAALTALFQFLLNSSTTIYAGHLGDAELSSISLYSSVMCAICFALIFGMSAGLGTLCGQAYGAGKVQSLGIYLQRSWIVALILVIILLPLYVYATPFLKLLGQENDIAELAGHYSILSIPYLFSYTINYPTQRFLQVQSKVNVIMFIAFIALVIHNVLLYLFIYVLSWGITGAAMASNLSSWVVAGGQVIYAVGWCKEAWTGLSWLAFKDLWGFARLAIASSLMMCFEQFYNPCIILLAGLLDNPVIAVGSYSICLNFAGWQMMLLIGVNIAVSVRISNKIGMQHPRAAKYSFLVTMFHSLLLGMVCMIAIFLSRDNLAIIFSNSRNMQLAVAELAYLLGLSMLINSASQVLSGVAIGSGWQVKVAYINLTCYYVVGIPLGLLLGFTAKAGVKGLWGGTLCGSILQVLCLLSVIWKTNWTKEVEQTAKRMQGSQLDPVKP* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0659 481 CDD MATE_eukaryotic 32 466 IPR045069 GO:0042910|GO:1990961
Lja5g0659 481 PANTHER PROTEIN DETOXIFICATION 1 474 - -
Lja5g0659 481 TIGRFAM matE: MATE efflux family protein 42 437 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja5g0659 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 474 - -
Lja5g0659 481 Pfam MatE 42 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lja5g0659 481 Pfam MatE 262 423 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0659 Lja-Chr5 5941923 5947192 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0659 K03327 - gmx:100789611 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0659 5 5941923 5947192 Lja5g0659 5 5941923 5947192 ECH