Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0652 ATGACACAATCGTTGGCAATGGTTTCTTCTACTGTGTTATGTCCTAAACTGGGGGCATGTGCAGTGTCACTGTCCCCCTCTGCAACTCCACACACAAAAATCCAACGTTTTCATCTCTCTTCATGGTTATCTCCAATGGGTCGAAGCCTTTTCTCACCTTGGAATGGTTTAAAGCATCTGGGTATCTCAACTAAACCAAAACCTCTTTTTCATATAGATAGAAAGGGTAGGTGTAAGGGTAAGCTGGTTTATGCTTCTCTCTTTGGAGTTGGAGCCCCTGAAGCCCTGGTTATTGGGGTCGTTGCTTTACTGGTTTTTGGTCCTAAGGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTACATTTCAACCGACCATTAGAGAGCTTCAGGATGTTTCAAGGGAATTTAAAAGTACACTTGAACGAGAGATTGGTCTCGATGACATTTCAAGTCCAACACAGAACCCATACAATTCCAATTTCCAAAACACCACATCAACTCCATCATCCACTGATAGTACAAAGAGTTCTCCGATTGCTGTTGACCCTGATGGCACGCAAGATCCAAGTAGAGCATACAGCTCTGAAGAGTATCTTAAGATTACAGAGGAGCAGCTAAAGGCATCTGCTGCACAACAGCAACAGGGACAGACACCCCCTCGTAAAGAAGGCGAGTTGGAACCTCAAATCCAGCCTCTTGCTGCTAAGGAAACAGCTACTACTGTGTCACCACCTCAGAAGCCAGAAAGTGAGACAATACCTCAGGATTCATAG 783 0.4483 MTQSLAMVSSTVLCPKLGACAVSLSPSATPHTKIQRFHLSSWLSPMGRSLFSPWNGLKHLGISTKPKPLFHIDRKGRCKGKLVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQDVSREFKSTLEREIGLDDISSPTQNPYNSNFQNTTSTPSSTDSTKSSPIAVDPDGTQDPSRAYSSEEYLKITEEQLKASAAQQQQGQTPPRKEGELEPQIQPLAAKETATTVSPPQKPESETIPQDS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0652 260 Pfam mttA/Hcf106 family 90 140 IPR003369 GO:0015031
Lja5g0652 260 MobiDBLite consensus disorder prediction 151 196 - -
Lja5g0652 260 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 15 255 - -
Lja5g0652 260 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 15 255 - -
Lja5g0652 260 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 89 134 IPR006312 GO:0016021|GO:0043953
Lja5g0652 260 MobiDBLite consensus disorder prediction 237 260 - -
Lja5g0652 260 Gene3D - 87 135 - -
Lja5g0652 260 MobiDBLite consensus disorder prediction 209 223 - -
Lja5g0652 260 MobiDBLite consensus disorder prediction 146 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0652 Lja-Chr5 5860549 5864587 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0652 - - ccaj:109806043 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0652 5 5860549 5864587 Lja5g0652 5 5860549 5864587 ECH