Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0639 ATGGAATCCCTTTGGAAACTTTTGTATTTGCTAGAGCCTGCACCTGTCACACTTATCACAACGGCTGTAGCTGTGACGTTTGGGTCTGCGTTTCGAGCTCTAAACTATGGGAAAGAAATGGAGCGCAATCGTGACTTCTCTGAAGCGTCCATTACGTTGGATAGGTCCCAAGCGTTGATGATCCCGGTGATGAGCTCTGTTAGCTTGCTTTTGATGTTCTACTTGTTCTCATCGGTCTCGCAGCTTCTCACGGCATTCACTGCAGTTGCTTCTGCGTCATCCCTTTTCTTCTGCTTATCTCCTTATGTTGCCTATCTGAAGTCACAGTTTGGTTTAGCGGATCCATATGTTTCACGGTGTTGCTCAAAATCTTTCACTCGAACCCAAGGAATGCTGTTGTTAACGTGCTCTTTTATAGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTGTTAGGCATATCTATATGCATTGCATTTGTAAGCCATGTGCGTCTTCCGAACATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTCGTGTATGACATTTTCTGGGTTTTCTTCTCCGAAAGATTTTTTGGGGCAAATGTCATGGTAACAGTGGCAACGCAGCAAGCATCAAATCCTGTGCACACAGTTGCTAATAGTTTAAGTCTTCCAGGGTTGCAATTGATAACAAAGAAATTGGAGTTGCCTGTAAAGATTGTTTTTCCAAGAAATTTGTTGGGTGGTGTTGTACCTGGAGAGAGTGCAACAGACTTTATGATGCTTGGTTTAGGTGACATGGCCATCCCAGGCATGCTCCTGGCTTTAGTCTTATGCTTTGATTATCGCAAGAGCAGGGATACAGTAAATCTCTTTGAGTTATATTCTTCAAAGGGGCACAAATACATATGGTATGCGCTACCTGGGTATGCCATCGGCCTGGTAACTGCTTTGGCAGCTGGTGTCTTGACCCACTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTTTGGGACCTGTAATTGTGATCTCTTGGATAAAAAAGGAGCTACTTGAGTTGTGGGAAGGAGACATGCCAAATCTCAATGATAAGGATCGCGAAATAGAAGTTTAG 1116 0.4373 MESLWKLLYLLEPAPVTLITTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALMIPVMSSVSLLLMFYLFSSVSQLLTAFTAVASASSLFFCLSPYVAYLKSQFGLADPYVSRCCSKSFTRTQGMLLLTCSFIVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVTVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVVPGESATDFMMLGLGDMAIPGMLLALVLCFDYRKSRDTVNLFELYSSKGHKYIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIVISWIKKELLELWEGDMPNLNDKDREIEV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0639 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016021
Lja5g0639 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 4 359 IPR007369 GO:0004190|GO:0016021
Lja5g0639 371 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 4 359 - -
Lja5g0639 371 Pfam Signal peptide peptidase 50 358 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0639 Lja-Chr5 5757152 5761302 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0639 K09598 - gmx:100794976 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0639 5 5757152 5761302 Lja5g0639 5 5757152 5761302 ECH