Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0623 ATGGATTCAAGAGTAGTTCCAAGTCAAGTGCATGAGAACAATGAAAATCACCCTCATGTTGCTTCACAACAAGTGACTCATGGTGAAGAAGAACACCACTCTGAGAATGAGAAGACGTCTGTTCTGAATAAGGTCAAGGTAAAGGCTAGGAAAATCAGGGACACGATTAAGAAGCATGGCCAGCAAGTCCTTGATCATGGTCATGAGTCCAACAATAAAGATCAGCATATCCCTGATGACCATGAGTTGGATGAAGAAAAAGAAATAGTTGAAGACCCAGAAGTTCAAGCAGCACCAAATTATGAAAATGAAGGTTTTAAAAGTACTACCCCTGCATCTGAGCAAGTTGAAAATTTTGGGAAGTCAGGAAGTGATTTTGGGAGCACAACAGTTATGGGAGAAGAACAACCCCATCAAGATCCAGTAGTTGTGGGCGTTTCTTCAACTGCTGAAATGAATCAAAACATTGACACTGAACCAGTCAAAAAAATTGCTGGGGAAGAAAAGCCAATGGATTTGGAGAGGCCAACAGTCTTGGAGGATGATCATCACGCTCAAGGAAGTAGACCTGAGGCATATACTCTTCCCAGTTATGAGACCAATGTCACTGTTCCAAGTGGGGCAGGAAGTGATGAAATAGAAGACATTAAAACTGTTGAAAAATCTTTTGAGAGAATGAATGTCCATGATGAGCCAAAACCTACACCAGAGCCAAAAGTACTGCCAGAAATTGCTGATACTGAATATCCTCCTACTGGAAGTAATGATCAGTTTGAACCAAACCTATCTGCTGCTACAGAAACCCACGATCCTTCTGCTAGAACTCATGATCAGCTCTCTTCGGAGAAGATATCTACAAATATCAATAGAAACCCGGAAATTGAAGAACAAACTTTCAACACCATCACAACCACACCTGAAGAACAACAATCAGTGAAGACAAAATCAAACCATAACAGTTACACAGATGAAATCTCATCGGCAACCGCTGATATAACTGTCTCTCCCGAGATTTCTGAAGCTTCTGATACTGCTGAAATGAATCAAAACATTGCCACTGAACCAGTCAAAACATTTGCTGGGGAAGAAAAGGCAATTGATTTGGAGAGGCCAATAGTCTTGGAGGATGATCCTCAAGGAAGTAGACCTGAGGCATATACTCTTCCAAATTATCAAACCAAAGCAACTGATCCAAGTGGGGCTGGGAGTGATGAAATAGAAGACATTAAAACTGTTGAGAAATCTTTTGGGAGAATGAATGTCCATGATGAGCCAAAACCAACCCCAGAGCCAAAAGTTCTGCCTGAAATTGCTGATACTGAATACCCTTCTACTGGAAGTAATGATCAGTTTAAATTTGAACCACACCTCTCTGCTGCAACAGAAATCCAGGATCCTTCTGCTAGAACTCATGATCAGTTCTCTTCAGAGAAGATATTTTCAGATAGCAATAGAAACCCGGAAATTGAAGAACAAACTGTCAACACCATCACAACCACAGCTGAAGAACCACAATCAGTGAAGACAAAATCAAACCATAACAGTTACACAGATGAAATCTCATCGGCAACCGCCGATATAACTGTCTCTCCCGAGATTTCTGAAGCTTCTGAGATTGGACATGATGAGAAAGGTGATAGAAACGACAAGGTGATGACTACCCTTGAAGAGCTGCAAAAGAGTGAGGATGTTTCTGACCCCTCAGGATCCACTGCAGAAAATGGAAAGAGCATTGCTCAGCCTCTGACAGAGAAATCAGCTCCAGTTTATGGGAAGGTAGCAGAGGTAGGAAGCACTGGTGGAGTTGGAACTGAAACAAAAAATGGGGTTGAAGATCAGAACAATGGGGTTGCTTTAAAGGACTATTTAGCTGAGAAGCTAAGGCCTGGTGAAGAAGACAAGGCACTTTCTGAGGTGATTTCAGAAGCTTTATATAAGGGAAAAGAAGAGGAAGTGAAAAAAGAGCAAGGAAATTTGGGTAGTGAAGATGAGAAGTCAGAGAAAGTGTGTGAGGACAACAGCTATGTGAAGAGTCCAGGAAAAGGTATGGTTGAAACGGTTAAGGGTGTTGTTGGGTCTTGGTTTGCCAAATCAGAGGAGACTCAATCACCACAAGTTGCAGGTGCTGCTGAGGATTTATCAAATGATAAAGGTTCTGGTGCTGAAGAGGAACATGTTAGCCAAGTTGTGGATGAAAGAAGAACCCAGGAGTGA 2214 0.4187 MDSRVVPSQVHENNENHPHVASQQVTHGEEEHHSENEKTSVLNKVKVKARKIRDTIKKHGQQVLDHGHESNNKDQHIPDDHELDEEKEIVEDPEVQAAPNYENEGFKSTTPASEQVENFGKSGSDFGSTTVMGEEQPHQDPVVVGVSSTAEMNQNIDTEPVKKIAGEEKPMDLERPTVLEDDHHAQGSRPEAYTLPSYETNVTVPSGAGSDEIEDIKTVEKSFERMNVHDEPKPTPEPKVLPEIADTEYPPTGSNDQFEPNLSAATETHDPSARTHDQLSSEKISTNINRNPEIEEQTFNTITTTPEEQQSVKTKSNHNSYTDEISSATADITVSPEISEASDTAEMNQNIATEPVKTFAGEEKAIDLERPIVLEDDPQGSRPEAYTLPNYQTKATDPSGAGSDEIEDIKTVEKSFGRMNVHDEPKPTPEPKVLPEIADTEYPSTGSNDQFKFEPHLSAATEIQDPSARTHDQFSSEKIFSDSNRNPEIEEQTVNTITTTAEEPQSVKTKSNHNSYTDEISSATADITVSPEISEASEIGHDEKGDRNDKVMTTLEELQKSEDVSDPSGSTAENGKSIAQPLTEKSAPVYGKVAEVGSTGGVGTETKNGVEDQNNGVALKDYLAEKLRPGEEDKALSEVISEALYKGKEEEVKKEQGNLGSEDEKSEKVCEDNSYVKSPGKGMVETVKGVVGSWFAKSEETQSPQVAGAAEDLSNDKGSGAEEEHVSQVVDERRTQE* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0623 737 MobiDBLite consensus disorder prediction 353 615 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 536 563 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 699 737 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 250 269 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 278 334 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 225 334 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 360 377 - -
Lja5g0623 737 PANTHER - 337 732 - -
Lja5g0623 737 PANTHER - 1 319 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 161 188 - -
Lja5g0623 737 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 337 732 IPR037491 GO:0009737
Lja5g0623 737 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 319 IPR037491 GO:0009737
Lja5g0623 737 MobiDBLite consensus disorder prediction 716 737 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 1 23 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 647 674 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 102 135 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 479 531 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 401 430 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 385 399 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 56 83 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 1 213 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 142 156 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 193 207 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 647 681 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 564 581 - -
Lja5g0623 737 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0623 Lja-Chr5 5582211 5586000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0623 - - lja:Lj5g3v2013770.1 1454.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0623 5 5582211 5586000 Lja5g0623 5 5582211 5586000 ECH