Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0622 ATGTTCAAATCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAGATGGAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGTCTGCACTGATGGTATCTTTGGTGCCAGATGATGTTGGGAAGCCAACAGTGAAACTGGAGAAAACCGCGGTCCAGGATGGGACTTGCATATGGGAGAATCCAATTTTTGAATCGGTTAAACTCGTTAGGGATGCAAAATCAGGGATACTACATGAGAAAATCTACCATTTCATTGTTTCAACTGGATCTTCAAAATCTGGCTATCTTGGGGAAGCCTCAGTTGATTTTGCTGATTTTGTAGCAGAAGTTGAGCCACTGACTGTTTCTCTACCCTTAAAGTTTGCCAATTCTGGGGTAGTTTTACATGTGACGATTCAGAACGTGGAAGGATATACTGCTGAAAGAAATGGGGAAGATAATGGAGCTGTGCAACTTTACAATGATGGAAGCTTGAAACACCAGCTGAGCTATGACAGTACAGATCAAGAAAGTTACAATATTGATGAAAATGGGCACCTGGCCAACTCTAGATCTGAGTATTCTGAACAAAATGCATCTAATGGCATCAGTCCTGGGGTAGCTTCATGGGAGGATCCTTATAGCTTCAGACAGAACTCCATGCCCTCAAAAGGAGCAGTTGAGGCCAAAGCAACAGAAACCCAAGCGCATAAGAGGTCAAACACAAACTGGTCGACGGGTTCAGCATCAGATGGGAGTTTAGGTGACTGGACAAACAGCCTGGAAGATACTCTTCCAAGAGTAAGATTACAAGAAACTTCAGATGATGCCACTGAGAATCTCAAGAATGAAATTGCTTCTCTGAAGAGGCAGGCAGAAGTATCAGAACTAGAGTTACAGTCACTTCGGAGGCAGATAGAAAAGGAAAGCACCCGAGGACAGAATTTGTCGAGGCAAATAATCAGCCTCAGGGAGGAGAGAGATTTGCTCAAGACCAAATATGAGCAAGTCAAGCCTGAGCAGAACTTAAACAATGAGAGCAAAATCTCTAAAAGTTTGAAGTCTGAGATTGAAGATACCAGGCTTCAGTTAGAGGCAATAAAGGAAGAGCTTGTTTATGAAAAAGAAGTGAGTGCCAATCTTCAATTGCAACTGCAGAAGACACAAAACTCAAATTCTGAACTACTTTTGGCTGTGACAGATCTTGAAGCAATGCTAGAACAAAAGAATAAGGAAATATTGGCTCTACCTACCAATATAAAATCCAAGAAGATTACTAAAGAGCATGATGATGCCACCGAATTGGATCTCTTGCGGCAGAGGATTGCAGACCAGGATGGTGAAATAGACAATTTCTGCAAGCAACGGGAAGAGCTAAGCGAGCATATAAAAGAGCTCACTTGGGAATATGAGCTTCTGAAGAAGGAAAATGTGGATATCTCTTTGAGATTAAAGCAGGATGAAGCACAACATATTAAGTTGCAAAATGAACATTCAGCTTCTTTAGTTACAATACAACAACTAGAATCTCAAGTAGAGAGACTAGAAGACAAGATAAAAATGCAGGAAGATGAATTTTCAGAATATTTGGTCTGCATCAAGGACCTTGAAAGTCAAGTTAAGTCTTTGGAGAAAGAATTGAAAATACAGGCAGAGAAATATGAAGATGATCTCCATGAAATGCAATGTGCAAAAACTGAGCAGGAAGAACGTGCCATCCAATTAGAAGAGGCATTGAAAAAGACAAGACACAATAATGCTCTCACATCTGAGCGTTTTCAGGAGGAATATAGATCTCTTTCTGTTGAAATGGCTCACAAAGTGGAGGAGAATGAAAAGATGGCCATGGAAGCAGTTGCAGAAGCTGATGAATTGCGACACCAGAACAAACTTATAGAAGAAATGCTCCATAAATGCAATGAAGAGCTCAGATTTATTACAAATCAGAATGAATCGAAACTGGAAGAGCTCTCGAACCAGATAAGTTCAAAAGAAAAAACAATAGAACAGATGTCACGAGAACTAGAAGTGAAGTCTAGACAACTTGAGGATGCACAAAGGCACAGGGATGAAAAGGATGCGGCATTTTCAAGGCAAATTCAAATGTTCAGATCTCAAATTAAAAAGTTGATGGAAGAGGAGTGTACATTCTCTAAACCCAAGCTAACAAATAAGATGTCTGAGACAGTAAGGAAAGATGCAGAAACAATCCCTGAACGACAACCATCTATGACAGTAAATGATGAGGAGATGATACTTGGAAACCTTCTGTCAGAAGTCGAAAACTTTAAGATCCAGCACAATGAAACAAAACACAGTTTGCACAAAGAACAAGTGGATAAAGAAAATATGAAGAAACACATCTCTCAACTAGAAGGAGAACTGAAGAAGAAGGAAGCAGAAGTAAATGCTATGGAAAAGAAGCTCAAGAATAACAAAGGACGAGCTCCTGTTACACAAATGAATTTGATTTCGAGAGACAATGAGTGTTATCCAACTCCTTCTGCTAAGTCACATATCAAGAAGTCAAAATCAGAAATGCTCAAGGGAATGAATGCTACAAGTGCTGCTAGCAAGTCAGAAGGAGGGACAATAGGGAAGTCAGCTCCCCGAAGTGATGTAAAAACTTGCTCTGCAAATGAGGTGATTGTCTCGAATAATCATGATGGTGAGTCCCACACAAATGAATTGTTGAATGAAGTGTCAGCCCTAAAGGACAGGAACAAGTCTATGGAAACTGAGCTAAAAGAAATGGAAGAAAGATATTCAGAGATTAGTCTGAAATTCGCAGAGGTGGAAGGAGAACGACAGCAGCTTGTTATGGCTCTACGTAATCTCAAGAATGGTAAGAAGAACTAA 2844 0.4012 MFKSWSKKNKIKAVFKMEFQATQVPKMKKSALMVSLVPDDVGKPTVKLEKTAVQDGTCIWENPIFESVKLVRDAKSGILHEKIYHFIVSTGSSKSGYLGEASVDFADFVAEVEPLTVSLPLKFANSGVVLHVTIQNVEGYTAERNGEDNGAVQLYNDGSLKHQLSYDSTDQESYNIDENGHLANSRSEYSEQNASNGISPGVASWEDPYSFRQNSMPSKGAVEAKATETQAHKRSNTNWSTGSASDGSLGDWTNSLEDTLPRVRLQETSDDATENLKNEIASLKRQAEVSELELQSLRRQIEKESTRGQNLSRQIISLREERDLLKTKYEQVKPEQNLNNESKISKSLKSEIEDTRLQLEAIKEELVYEKEVSANLQLQLQKTQNSNSELLLAVTDLEAMLEQKNKEILALPTNIKSKKITKEHDDATELDLLRQRIADQDGEIDNFCKQREELSEHIKELTWEYELLKKENVDISLRLKQDEAQHIKLQNEHSASLVTIQQLESQVERLEDKIKMQEDEFSEYLVCIKDLESQVKSLEKELKIQAEKYEDDLHEMQCAKTEQEERAIQLEEALKKTRHNNALTSERFQEEYRSLSVEMAHKVEENEKMAMEAVAEADELRHQNKLIEEMLHKCNEELRFITNQNESKLEELSNQISSKEKTIEQMSRELEVKSRQLEDAQRHRDEKDAAFSRQIQMFRSQIKKLMEEECTFSKPKLTNKMSETVRKDAETIPERQPSMTVNDEEMILGNLLSEVENFKIQHNETKHSLHKEQVDKENMKKHISQLEGELKKKEAEVNAMEKKLKNNKGRAPVTQMNLISRDNECYPTPSAKSHIKKSKSEMLKGMNATSAASKSEGGTIGKSAPRSDVKTCSANEVIVSNNHDGESHTNELLNEVSALKDRNKSMETELKEMEERYSEISLKFAEVEGERQQLVMALRNLKNGKKN* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0622 947 Coils Coil 387 407 - -
Lja5g0622 947 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Lja5g0622 947 MobiDBLite consensus disorder prediction 185 255 - -
Lja5g0622 947 Coils Coil 493 580 - -
Lja5g0622 947 MobiDBLite consensus disorder prediction 231 255 - -
Lja5g0622 947 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Lja5g0622 947 Coils Coil 889 930 - -
Lja5g0622 947 Coils Coil 769 810 - -
Lja5g0622 947 MobiDBLite consensus disorder prediction 185 200 - -
Lja5g0622 947 MobiDBLite consensus disorder prediction 849 869 - -
Lja5g0622 947 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 947 - -
Lja5g0622 947 Coils Coil 345 365 - -
Lja5g0622 947 Coils Coil 444 471 - -
Lja5g0622 947 Coils Coil 603 683 - -
Lja5g0622 947 PANTHER BNAC08G20130D PROTEIN 1 947 - -
Lja5g0622 947 Coils Coil 266 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0622 Lja-Chr5 5575507 5581189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0622 - - gmx:100806603 1391.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0622 5 5575507 5581189 Lja5g0622 5 5575507 5581189 ECH