Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0593 ATGGCAATAGACTGCATAACAAGCATACAACACTCCATGGTGCCTCAACAAGAAACCAAAGATGAAGAACAGCCACCATTGGTTTTTGATGCCTCAGTTCTCAGGCACCAGCTTCATCTTCCAACACAGTTCATCTGGCCTGATGAAGAGAAAGCCTGCTATGATGTGCCAGAGCTTGCAGTTCCATTCATTGACTTGAGAGGGTTCCTCTCAGGTGATCCAGTTGCAGCAATGGAAGCTTCAAGGCTTGTTGGTGAAGCATGCCAAAAGCATGGCTTTTTTCTTGTTGTCAATCATGGGATTGAGAAAAAGTTGATCTCTGATGCTCATCTTTTCATGGAAGACTTCTTTGAACTTCCCCTGTCTCAGAAACAGAGGGCTCAGAGGAAAACAGGGGAGCACTGTGGTTATGCCAGCAGCTTCACTGGGAGATTCTCATCTAAGCTTCCTTGGAAAGAGACACTGTCCTTTCAATTCTCAGATGAAAAAACCTCATCAAACCTTGTCAAAGACTACTTATGCAATACAATGGGAGATGATTTTGAGCAATTTGGGGAGGTTTACCAGGACTATTGTGAAGCTATGAGCAATCTTTCTTTAGGGATAATGGAGCTTTTAGGGATGAGCCTTGGAGTTGGTAGAGGCTATTTTAAGGAGTTCTTTGAAGAGAACAGTTCAATAATGAGGCTCAATTACTACCCTCCTTGTCAAAAGCCAGACCTCACTTTAGGCACAGGGCCTCATTGTGATCCAACATCTTTAACTATTCTTCACCAGGACCAAGTGGGAGGCTTGCAAGTTTTTGTTGACAATGAGTGGCATTCCATTAGCCCAGATTTGAATGCTTTTGTTGTCAATATTGGTGATACTTTCATGGCTCTTTCAAATGGGAGATACAAGAGCTGCTTGCACAGGGCAGTGGTGAACAGCGAGAAGACAAGAAAATCTCTTGCTTTCTTTTTGTGTCCCAGAAATGATAAGGTGGTAACTCCACCATGTGAGTTAGTGGACAGTTGCAACCCAAGGATCTACCCAGATTTCACATGGCCTACGTTGCTTGAGTTCACACAGAAGCACTATAGAGCTGACACCAAAACCCTTGAGGCATTTGCCAACTGGCTTCAACGTAAAAGGAACTGA 1140 0.4377 MAIDCITSIQHSMVPQQETKDEEQPPLVFDASVLRHQLHLPTQFIWPDEEKACYDVPELAVPFIDLRGFLSGDPVAAMEASRLVGEACQKHGFFLVVNHGIEKKLISDAHLFMEDFFELPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSDEKTSSNLVKDYLCNTMGDDFEQFGEVYQDYCEAMSNLSLGIMELLGMSLGVGRGYFKEFFEENSSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSISPDLNAFVVNIGDTFMALSNGRYKSCLHRAVVNSEKTRKSLAFFLCPRNDKVVTPPCELVDSCNPRIYPDFTWPTLLEFTQKHYRADTKTLEAFANWLQRKRN* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0593 379 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 376 - -
Lja5g0593 379 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 164 IPR026992 -
Lja5g0593 379 Gene3D - 32 362 IPR027443 -
Lja5g0593 379 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 17 376 - -
Lja5g0593 379 Pfam 2OG-Fe(II) oxygenase superfamily 226 323 IPR044861 -
Lja5g0593 379 PRINTS Isopenicillin N synthase signature 84 101 - -
Lja5g0593 379 PRINTS Isopenicillin N synthase signature 283 309 - -
Lja5g0593 379 PRINTS Isopenicillin N synthase signature 248 269 - -
Lja5g0593 379 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 323 IPR005123 -
Lja5g0593 379 SUPERFAMILY Clavaminate synthase-like 34 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0593 Lja-Chr5 5309598 5312271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0593 38 373 Glycosyltransferase AT5G59530 28.779 2.88e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0593 K05282 - gmx:100816992 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0593 5 5309598 5312271 Lja5g0593 5 5309598 5312271 ECH