Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0581 ATGCTTTCCCAATCCCTCCACCCCTCACCGGAAGTACCCCAACATCACCGAAGACCCAAGTCCCCGGAAACCACCCTCACCGCCGTTCTTCAACCTCTACTCTCCCTTCAAAACCCTCGTTCATGGATCTTCTTAACCATCCTCTTCATCCAGATCGTCCTCCTCTGCAACCTCCGTAGCTTCCCCACCTCAATCTCCATCACCCGCCGCCACCTCCCCACCCCCCTCGCCGCCATCGACGAAACAACAACAAATCCCTCCCAAAACGCCACCCTCCATGATAACGCCACCCTCCACGACTCTTCATCTTCATCTCCCTCCACCACCGACGACGACCAATGTAGCTCCGGCAGGGTCTTCGTCTACGACCTTCCCGCAACCTTCAACCAAGAAATCCTCGACAATTGCGACAATCTCAACCCGTGGAGCTCCCGCTGTGACGCCCTCGCAAACAACGGCCTCGGGCAGAGCGCGACCACTCTCGCCGGAATCATACCGGAGGAGATTCTCCCGGCGTGGCACTGGACAGACCAGTTCGTCTCCGAAATCATCTTCCACAACCGCTTACTCAACCATAAGTGCAGAGCCACAGAGCCAGAATCAGCTACAGCGTTCTACATCCCGTTCTACGCTGGACTCGCGGTGGGGAAGTACCTCTGGGAAAACGAAAACTCCACCGCAGAGGTTCGCGATCGCCACTGTGACATGATGCTCCGGTGGCTCCAGGACCAACCGCAGTACAGAAGATCCAACGGTTGGGATCACTTCATCACGATGGGTCGCATCACGTGGGATTTTCGCCGCTCGAAAGATGAAGATTGGGGTTCTAGCTGCATCTACAAGCCAGGGTTGAGAAACATCACGCGCCTCCTCATCGAGCGGAATCCATGGGACTATTTCGACGTCGGTGTTCCCTACCCCACCGGATTCCACCCTCGCTCCCTCTACGACGTCGCACGGTGGCAGAGTTTCGTCCGTGAACGCCGCCGGAGTGCTCTGTTTTGCTTCGCCGGAGCACCGAGACGCGCCTTTAGAAATGATTTCAGAGGGGTTCTGCTGAATCAGTGCCGTGAATCTTCCGGTTCGTGCCGCGCGGTGGATTGCGGGAAGAATCGGTGCGCGAACGGCACGTCGGCGATCCTCGAGACGTTTCTGGACTCGGAGTTTTGCTTGCAGCCGAGAGGGGATAGCTTCACGCGGCGGTCGATTTTTGATTGCATGGTGGCCGGTTCGATTCCGGTTTTTTTCTGGCGGCGAACCGCGTACTTGCAGTATCAGTGGTTTTTGCCGGGTGAACCGGGGAGTTATTCGGTTTATATAGACCGGAATGCGGTGAAAAATGGGACCTCGGTGAAGGCGGTGCTTGAGGGGTTTAGCAAGGAGGAGGTGAGGAGAATGAGGGAGAAGGTGATTGAGTACATTCCGAGATTGGTTTATGCGAAGAGTAACGAAGGGTTGGACGGGATGAAGGATGCTTTTGATGTTGCCATTGAAGGTGTGCTGAGAAGGGTTAAGGAACAAGAACAACCTGGATTTACAAAGTGGTAA 1548 0.5556 MLSQSLHPSPEVPQHHRRPKSPETTLTAVLQPLLSLQNPRSWIFLTILFIQIVLLCNLRSFPTSISITRRHLPTPLAAIDETTTNPSQNATLHDNATLHDSSSSSPSTTDDDQCSSGRVFVYDLPATFNQEILDNCDNLNPWSSRCDALANNGLGQSATTLAGIIPEEILPAWHWTDQFVSEIIFHNRLLNHKCRATEPESATAFYIPFYAGLAVGKYLWENENSTAEVRDRHCDMMLRWLQDQPQYRRSNGWDHFITMGRITWDFRRSKDEDWGSSCIYKPGLRNITRLLIERNPWDYFDVGVPYPTGFHPRSLYDVARWQSFVRERRRSALFCFAGAPRRAFRNDFRGVLLNQCRESSGSCRAVDCGKNRCANGTSAILETFLDSEFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYQWFLPGEPGSYSVYIDRNAVKNGTSVKAVLEGFSKEEVRRMREKVIEYIPRLVYAKSNEGLDGMKDAFDVAIEGVLRRVKEQEQPGFTKW* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0581 515 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 19 509 IPR004263 GO:0006486|GO:0016757
Lja5g0581 515 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 19 509 - -
Lja5g0581 515 MobiDBLite consensus disorder prediction 80 114 - -
Lja5g0581 515 Pfam Exostosin family 114 452 IPR040911 -
Lja5g0581 515 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0581 Lja-Chr5 5181256 5183337 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0581 - - gsj:114403132 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0581 5 5181256 5183337 Lja5g0581 5 5181256 5183337 ECH