Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0580 ATGGACAACCAGGTTAAAGTTCGATGCCAGAGGATTGGTTGCGATGCTGTCTTCCACGAGGACGATAATCCCGAAGGTTCCTGTCAATACCACGATTCGGGACCTTTATTTCACGATGGGATGAAAGAATGGAGTTGTTGCAAGAAGAGAAGCCATGATTTTAGTTTGTTTTTACAAATTCCTGGATGTAAGACAGGAAAACATACAACAGAGAAGCAAGTAATTGCACCAGTTAAGAAGAACCCTGTGCCCACTCCAACTGCAGCTCCTTCAACCAATGCATCAGCGAAGGACTCCTGTTCGAGGTGTCGGCAGGGTTTCTTTTGCTCAGATCACGGTTCACAAAGCAAAGCTGTGAATATTGTTGGAGACAAATCTGTTAATCGTGCTGGAGATGCCCCTGCTGTAAACAGTTCCATTGTTCAGGCTCCGAAACCTCCTAAGAAAATAGTTGATATAAATGAACCCCAAACATGCAAAAATAAAGGGTGTGGACAAACTTTCAAGGAAAAGGATAATCATGACACTGCATGCAGCTACCATCCTGGCCCTGCTGTTTTTCACGATCGAATGAGAGGGTGGAAGTGCTGTGATGTTCATGTAAAAGAATTTGATGAGTTTATAAGCATTCCTCCATGCACAAAGGGATGGCATAACGCTGATCCAGATTCTTGA 675 0.437 MDNQVKVRCQRIGCDAVFHEDDNPEGSCQYHDSGPLFHDGMKEWSCCKKRSHDFSLFLQIPGCKTGKHTTEKQVIAPVKKNPVPTPTAAPSTNASAKDSCSRCRQGFFCSDHGSQSKAVNIVGDKSVNRAGDAPAVNSSIVQAPKPPKKIVDINEPQTCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDVHVKEFDEFISIPPCTKGWHNADPDS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0580 224 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 223 IPR043316 -
Lja5g0580 224 ProSiteProfiles CHORD domain profile. 159 218 IPR007051 -
Lja5g0580 224 Gene3D - 151 221 - -
Lja5g0580 224 Gene3D - 1 72 - -
Lja5g0580 224 ProSiteProfiles CHORD domain profile. 9 68 IPR007051 -
Lja5g0580 224 Pfam CHORD 158 218 IPR007051 -
Lja5g0580 224 Pfam CHORD 8 68 IPR007051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0580 K13458 - gmx:100194419 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0580 5 5163725 5167912 Lja5g0580 5 5163725 5167912 ECH