Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0462 ATGAAGTTGAGACTCAGATCTCTGGAATCCAAAGAAACCCACAAAATCGAAGTTCCCGATCCCTGTTCCTTGCACCTACTCAAAACCATCGTTTCTCTTTCAATCTCTGGTTCCTCCGATTCTTCTCTGCATCTCTCCCTCAACCGGAAGGACGAAATCCACGCCTCCTCGCCGGACGACTCCCTCCAATCCATCGGCATCGCCGCCGGCGACCTCGTCTTCTACACTCTCCACCCTAATTCCCTATCCCGCGAAACCCTCCCTCACAAGCCCACCCCACAACCAGAAGTATCAGATTCCCCGGACCGACCCATGATCCAAAGCTCATCGGAAATCAACGCTAGGGATGCAAAGTCTCCGTCTTTGGATGTTACAGAACCGGAAACCATGGAAATCGATGATGGGTCTGATGAGGCGGTGGTGGGGTATGGGTGGGGTAATTACCAGCCTTTGTTTGTGAAAAGTGTGCTCAGAGAAGCGGCTATCGGCGACGACGCTAGCGATTTCAAGCTGTTGATTCTTGCGGTCCATGCTGTTATTCTTGAATCTGGGTTTATTCGTGTGGATCAGGTTTCTGGCATGGCGGTTAATTGCTCTCATCTTCTTGATGACTTTCCTTCAGGGTCAAGTCCGGTGAAATCCTTAAGGTACACTCTGCCTGAGATTTTGACTAAGGGTTCTTCTGAATCTGTGAGTTTGAAAATTCAGACACTAGGGCACATAGTGAATGTTTGTGGGTCATTGTCTAATGATAATGGTTCAAGGTTGCATATGGTTTATCTTGATAGAAATAAATTTGCCCCACCTTTGGACTTTTTGCTTGCAAATTCTGAGTCTAAGGTTGGAGATGATGAATCTGGAAATAGAGAAAAAGTTTTTGAGTTGTGGAAGATGGTGAAAGATGGACTTGCATCGCCACTCTTGATTGATCTTTGTGAGAAGTCTGGATTAGATCTGCCACCTTGCTTTATGCGGCTACCGACTGATCTGAAGCTTATAATCATGGAAAATCTTCCTGGTGTTGATTTGGCTAAAGTAGCTTGCTTGAATTCAGAAATGCGGTATTTGGCCTCCAACAATGAGCTATGGAAGAAGAAGTTTAAGGAGGAGTTTGGTATAGGAGAGAGTGGAGGACAGTTTTTTAAGCATTTGTTTGCTCAGTACTGGACAACAAAGAAGAATTCAGAGCAACCACGTCGTCGAGCATTTCAGCCTGGTACAGGATTCTTCCCAATGAGAAGAAACCTCTATCCGAGAAGAAACCCCAATCCTTTTGGAGTACCTCCAATTTGGGGTGGAGAATATGATCTGCAGCCAAACATTGGTGGACAACTTCGTGCGAACCCACGAAGGGGGACTTTCCTTCCCCCATGTCACCTGGGAGGATTTGATGCGTAA 1398 0.4635 MKLRLRSLESKETHKIEVPDPCSLHLLKTIVSLSISGSSDSSLHLSLNRKDEIHASSPDDSLQSIGIAAGDLVFYTLHPNSLSRETLPHKPTPQPEVSDSPDRPMIQSSSEINARDAKSPSLDVTEPETMEIDDGSDEAVVGYGWGNYQPLFVKSVLREAAIGDDASDFKLLILAVHAVILESGFIRVDQVSGMAVNCSHLLDDFPSGSSPVKSLRYTLPEILTKGSSESVSLKIQTLGHIVNVCGSLSNDNGSRLHMVYLDRNKFAPPLDFLLANSESKVGDDESGNREKVFELWKMVKDGLASPLLIDLCEKSGLDLPPCFMRLPTDLKLIIMENLPGVDLAKVACLNSEMRYLASNNELWKKKFKEEFGIGESGGQFFKHLFAQYWTTKKNSEQPRRRAFQPGTGFFPMRRNLYPRRNPNPFGVPPIWGGEYDLQPNIGGQLRANPRRGTFLPPCHLGGFDA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0462 465 SMART fbox_2 326 366 IPR001810 GO:0005515
Lja5g0462 465 ProSiteProfiles F-box domain profile. 320 366 IPR001810 GO:0005515
Lja5g0462 465 PANTHER F-BOX PROTEIN SKIP22 1 464 - -
Lja5g0462 465 SUPERFAMILY F-box domain 320 377 IPR036047 GO:0005515
Lja5g0462 465 Gene3D - 149 322 - -
Lja5g0462 465 PANTHER F-BOX PROTEIN SKIP22 1 464 - -
Lja5g0462 465 MobiDBLite consensus disorder prediction 101 116 - -
Lja5g0462 465 MobiDBLite consensus disorder prediction 83 132 - -
Lja5g0462 465 Gene3D - 323 401 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0462 K10293 - gmx:100796338 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0462 5 4081117 4082842 Lja5g0462 5 4081117 4082842 ECH