Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0455 ATGGCAGGAGGAGGAGGAGGAAAGGCTGATGAATTCGAACCTCATCCTGTGAAGGATCAACTTCCAGGTGTTGATTACTGTGTTAGCAGCTCTCCCTCTTGGCCTGAAGGGATTCTCCTTGGGTTTCAGAACTATCTGGTTATGCTTGGGACCATCGTCATTGTTTCAACCATTCTTGTCCCTTTGATGGGTGGTGGCAATGTGGAGAAGGCTGAAATGATACAGACTCTGCTGTTTGTTGCTGGCATAAACACACTGCTGCAAACATGGTTTGGAACAAGGCTTCCAGTGGTTGTGGGGGCATCCTATGCTTTCATCATTCCTGCTGTTTCCATTGCTTTATCTAGCAGGATGAGTGTATTTCCTGATCCACATCAGAGATTTAAACGATCCATGAGAGCAATACAAGGGGCACTTATTATAGCATCGTTATTTCAAATCATCATTGGCTTTTTTGGATTCTGGAGGATATTTGCCAGGTTTCTCAGCCCTCTCAGTGCTGTTCCCCTTGTCACCCTTACTGGCCTAGGACTCTTTGCAATAGGGTTTCCAAGATTGGCAGATTGTGTTGAAATTGGTCTTCCTGCATTGGTTATTCTGGTTATTCTGTCCCAGTATATTCCCCAGAAGTTGAAATCAAAAGGGGTTGATCGATTTGCGCTACTAGTCTCAATTGGAATTGTATGGGCTTTTGCTGAGATTTTGACTGCTGCTGGAGCATATAATAAAAGATCCCCGACAACTCAATTCAGTTGTCGTACCGATCGATCCGGATTAATCAGTGCTGCTCCATGGATAAGAGTTCCATATCCATTTCAATGGGGAAGGCCTTCTTTCGATACTGGTGATACTTTTGCAATGGTTGCTGCTTCGCTTGTTGCAATTATAGAGTCAACTGGGACATTCATTGCAACATCAAGACTTAGCAGTGCAACCCCAATTCCTCCCTCTGTCCTTAGCCGCGGTGTTGGCTGGCTGGGTGTGGGTACTCTTGTAGATGGCTTTTTTGGCGCAGCAACTGGATCTACTGCATCAGTTGAAAATGCAGGACTACTGGGTTTAACGCGAGTTGGAAGTCGGAGAGTCATTGAAATATCAGCAGGATTCATGCTTTTCTTCTCTATATTAGGTAAATTTGGAGCTGTTCTTGCCTCAATACCATTGCCAATTATAGCAGCTCTTTACTGTGTTCTCTTCGCCTATGTGGCTTCAGCTGGCCTTGGTTATCTTCAGTTCTGCAATCTAAATAGCTACAGATCAATGTTCATCATTGGCTTTTCTCTCTTCCTGGGCCTATCAGTTCCGCAATATTTCAATGAACAACTGTTGCTATCCGGACATGGCCCTGTTCATACCGGCTCTATTGCGTTCAACAACATAGTGCAAGTGATTTTCTCATCCCCAGCAACTGTGGCAATTATAGTTGCTTACTTGCTGGATGTCACTCTGAGTCGCGGGCACAGCTCAACTCGCCGAGACAGTGGGAGACACTGGTGGGAAAAATTCAGGAACTTCGATCAGGATCACAGAAATGAAGAGTTCTATTCACTGCCTATGAACCTAAACAGATATTTCCCTTCATTATGA 1587 0.4468 MAGGGGGKADEFEPHPVKDQLPGVDYCVSSSPSWPEGILLGFQNYLVMLGTIVIVSTILVPLMGGGNVEKAEMIQTLLFVAGINTLLQTWFGTRLPVVVGASYAFIIPAVSIALSSRMSVFPDPHQRFKRSMRAIQGALIIASLFQIIIGFFGFWRIFARFLSPLSAVPLVTLTGLGLFAIGFPRLADCVEIGLPALVILVILSQYIPQKLKSKGVDRFALLVSIGIVWAFAEILTAAGAYNKRSPTTQFSCRTDRSGLISAAPWIRVPYPFQWGRPSFDTGDTFAMVAASLVAIIESTGTFIATSRLSSATPIPPSVLSRGVGWLGVGTLVDGFFGAATGSTASVENAGLLGLTRVGSRRVIEISAGFMLFFSILGKFGAVLASIPLPIIAALYCVLFAYVASAGLGYLQFCNLNSYRSMFIIGFSLFLGLSVPQYFNEQLLLSGHGPVHTGSIAFNNIVQVIFSSPATVAIIVAYLLDVTLSRGHSSTRRDSGRHWWEKFRNFDQDHRNEEFYSLPMNLNRYFPSL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0455 528 Pfam Permease family 38 438 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja5g0455 528 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 527 - -
Lja5g0455 528 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED 6 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0455 Lja-Chr5 3979080 3983675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0455 8 528 Organic Solute Cotransporters AT1G49960 70.937 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0455 - K23717 gmx:100820533 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0455 5 3979080 3983675 Lja5g0455 5 3979080 3983675 ECH