Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0451 ATGAGAGTATTTATGACCAAAGTTGGACTCACTGTCCATTCTCTGTCTCACTCTTATGATGATTCTGCTACCACAGAGTGCCTGGCAGAACCTCAGAGGGAACAATATGGAGGAGGCATTATAGTGAACCCAGCATTCGATCACAGCTTAGAGGGTTGGACAATGGTTGGAAATGGAGCAATCGAAAAACGAAGATCCAATGAAGGCAATGCATTCATTGTGGCCAGAAACAGAACAAAACCTTTGGATAGTTTCTCACAGAAGGTTCAACTTAAGAAAGGAATGATATACACCTTCTCTGCTTGGTTGCAACTCAGTAAAGGAAGTGAAACTGTGTCAGTTGTATTTAAAATACATGGAAGTGAACTGATACGAGGTGGGCATGTGATTGCAAAGCATGGGTGCTGGACTTTGCTGAAAGGTGGTTTAGTTGCAAACTTCACAAGCCCTGCTGATATTCTTTTTGAGAGCAAGAATCCAACAGTGGAAATATGGGCTGATAGTGTATCCTTACAACCATTCACCAAAGAGGAATGGAGATCACACCAAGAAGACAGCATTGAGAGGGTACGGAAGAGAAAGGTGAGATTCCAAGTAACTCATATAAACGAAACAGCATTAGAAGGAGCTACAATTTCCATCAAACAAACAAGGCCACACTTCCCATTTGGATGCGGAATGAACAACAATATCCTCACAAACAGTGCATACCGGAAATGGTTTATGTCAAGATTCAAACACACAACCTTCACCAACCAGATGAAGTGGTACAGTACAGAGAAAGTTCAAGGCCAGGAAAACTACACTATCCCAGATGCCATGCTGGCATTGGCCAATGACAATGGCATTTCTGTTAGAGGCCATACCATTTTATGGGACGACCGAAACTTTCAGCCTGAATGGGTCAAATCCTTATCTCCTCAGGATTTGAGAGAAGCAGCAAGAAAGAGAATCAATTCTGTGGTTTCAAGATATAAGGGAGACCTGATAGCATGGGATGTTGTGAATGAGAATCTCCACTACAACTTTTATGAGCAGAACTTTGGTGAAAATGCTTCTGCAATGTATTACTCAACAGCTTACCATCTTGATCCAAATGCAAGAATGTTCCTGAATGAGTTTAACACCATTGAATATAGTGGGGATGTGGTTGCCAACCCAGCAAACTATATCAGGAAAATTCGAGAGATTCAGCAGTTTCCAGGAACTAAAGGAATACCATTAGGAATTGGGTTGCAATGCCATTTTGCTTCTGGCAATCCAAATCTTGCTTACATGAGATCAGGGCTTGATATTCTTGGTGCAACTGGATATCCAATATGGCTCACAGAAACTAGTATAGATCCACAACCAAATCAGGAAGAGTATTTTGAATGGATTCTAAGAGAGGGTTACTCACATCCTGCTGTTCAAGGGATTATAATGTTCATGGGTCCAGTGCAAGCTGGTTTCCAGAAGGCTCCTCTAGCAGATGAAAATTTCACAAATACTCCAATGGGAGATGTTGTGGACAAGCTAATTCGTGAGTGGGGAACTGGGCCTCATGAAACCATGGCAGATAGCAGAGGAATTGTAGACATTTCACTACATCATGGAGATTATGATGTAATTGTTTCACATCCTCAAACACACTTCTCCAAAACACTCAATCTAAGTGTAAGGAAAGAGTTTTCACAGCAAACAATCCATCAAACTGTAATTACAAATGTAAAATTAAAATATTATAATAAAATGGAGAAGACGGATTCAATCGCCAGTATTTGTAACCAAGTTTCTAGTTGTTCATCACCGCCACCGGTGAATTTGTGGCATTTTTGCAACAAATTTCTAGCGGTGTAG 1839 0.4089 MRVFMTKVGLTVHSLSHSYDDSATTECLAEPQREQYGGGIIVNPAFDHSLEGWTMVGNGAIEKRRSNEGNAFIVARNRTKPLDSFSQKVQLKKGMIYTFSAWLQLSKGSETVSVVFKIHGSELIRGGHVIAKHGCWTLLKGGLVANFTSPADILFESKNPTVEIWADSVSLQPFTKEEWRSHQEDSIERVRKRKVRFQVTHINETALEGATISIKQTRPHFPFGCGMNNNILTNSAYRKWFMSRFKHTTFTNQMKWYSTEKVQGQENYTIPDAMLALANDNGISVRGHTILWDDRNFQPEWVKSLSPQDLREAARKRINSVVSRYKGDLIAWDVVNENLHYNFYEQNFGENASAMYYSTAYHLDPNARMFLNEFNTIEYSGDVVANPANYIRKIREIQQFPGTKGIPLGIGLQCHFASGNPNLAYMRSGLDILGATGYPIWLTETSIDPQPNQEEYFEWILREGYSHPAVQGIIMFMGPVQAGFQKAPLADENFTNTPMGDVVDKLIREWGTGPHETMADSRGIVDISLHHGDYDVIVSHPQTHFSKTLNLSVRKEFSQQTIHQTVITNVKLKYYNKMEKTDSIASICNQVSSCSSPPPVNLWHFCNKFLAV* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0451 612 Pfam Glycosyl hydrolase family 10 218 454 IPR001000 GO:0004553|GO:0005975
Lja5g0451 612 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 10 563 - -
Lja5g0451 612 SMART glyco_10 254 506 IPR001000 GO:0004553|GO:0005975
Lja5g0451 612 Gene3D - 28 174 - -
Lja5g0451 612 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 208 506 IPR001000 GO:0004553|GO:0005975
Lja5g0451 612 PANTHER GLYCOSYL HYDROLASE 10 563 IPR044846 GO:0004553|GO:0005975
Lja5g0451 612 Gene3D Glycosidases 209 512 - -
Lja5g0451 612 SUPERFAMILY Galactose-binding domain-like 37 173 IPR008979 -
Lja5g0451 612 Pfam Carbohydrate binding domain 39 121 IPR003305 GO:0016798
Lja5g0451 612 SUPERFAMILY (Trans)glycosidases 207 514 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0451 Lja-Chr5 3948197 3954790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0451 19 556 Glycoside Hydrolase AT4G33840 51.017 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0451 - - mtr:MTR_1g106770 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0451 5 3948197 3954790 Lja5g0451 5 3948197 3954790 ECH