Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0449 ATGTCTCACCGAGACTCTGATTCGAAGCTTCGCCATTCCAAGTTCGATCGTGAACCAAGCCCCAAGAGATATCGAAGGGATGGAAAACAAGATAGGGAAAGGGATAGAGATAGAGATAGAGAAAGGGAAAGGGGAAGTGAAAGAGGAAGGGACAGGGACAGAGTAACCACAAATGGTGGAGGAGGAGCAGGAGGAGACCAGAATCCTACAGATCGTGATCAGAGAAACCTACCGCCACCTCCTCATTCTAAGCAGGAGTCTGTTGGTGCTGGTGACAAGAAATCAAATGATCATCAGGAGCCACCCAAACATTCAGCTCAACCACCGAGATCTCGCTCGTATTATCAGCATGCTGAACGGGGTAATACTGAGCAGGTTGGTCGAAGTGCTGGTCGAAGGGAAGCTGGTGGAAAAGCTTTTGCTCAAAGTAAAGAGAATAGCGAAAGGGTGGAGACAAGTCAAAGTAGAGAACAGAGAGATGAGAAATCACAGGCTAAACTGGATGATAATCTCCACAGAAGAGATGGTTCTCCTGAAAGGAAAGATGATCCACCTTCTAATACTAGGAAAAGACCAGCATTTAGGGAGAAGAAGATTCAAGGGGATTCAGGAGATGCTAATCCAGCTGTGAGTACTGAGAGAGTAAAGGCCAGCCATACTGACCACCCTCCTGAAAGGAATGAAAGGAAGGAGGAAAGAAGTGGCAACCCTCGCCATCTGGAAAGACATGAGAAGCAAATTGCAGGGGACAGAGCACCCAACAGGAGTGAAGGTAGGAGGGATGGCTTTTCATCAAGGGCAAGGTATGGGGGCAGTGGAGGCAATAATAATGACAGGGGAAGAGATAAATTTAATGCAAGACAAGGTTATCATCCTATTAAGACTCGAACAGAGAAGTGGAAGCATGATTTGTTTCAAGAGGCTGACAACGATCCTGTTCCAAAGAATGAGGATGACCAGATTGCAAAGCTGGAAGCACTCTTGGCTTCATAA 993 0.4663 MSHRDSDSKLRHSKFDREPSPKRYRRDGKQDRERDRDRDRERERGSERGRDRDRVTTNGGGGAGGDQNPTDRDQRNLPPPPHSKQESVGAGDKKSNDHQEPPKHSAQPPRSRSYYQHAERGNTEQVGRSAGRREAGGKAFAQSKENSERVETSQSREQRDEKSQAKLDDNLHRRDGSPERKDDPPSNTRKRPAFREKKIQGDSGDANPAVSTERVKASHTDHPPERNERKEERSGNPRHLERHEKQIAGDRAPNRSEGRRDGFSSRARYGGSGGNNNDRGRDKFNARQGYHPIKTRTEKWKHDLFQEADNDPVPKNEDDQIAKLEALLAS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0449 330 MobiDBLite consensus disorder prediction 109 123 - -
Lja5g0449 330 MobiDBLite consensus disorder prediction 1 318 - -
Lja5g0449 330 MobiDBLite consensus disorder prediction 87 105 - -
Lja5g0449 330 MobiDBLite consensus disorder prediction 215 264 - -
Lja5g0449 330 PANTHER OS03G0203000 PROTEIN 3 330 - -
Lja5g0449 330 MobiDBLite consensus disorder prediction 280 318 - -
Lja5g0449 330 MobiDBLite consensus disorder prediction 149 202 - -
Lja5g0449 330 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0449 Lja-Chr5 3935610 3938470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0449 - - gmx:100777449 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0449 5 3935610 3938470 Lja5g0449 5 3935610 3938470 ECH
Lja1g6057 1 111503541 111505678 Lja5g0449 5 3935610 3938470 PCT