Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0443 ATGGTGGTCTGCAAATGTCGCAAGGCTACTAAGTTATATTGCTTCGTGCACAAAGTTCCTGTCTGCGGAGAATGTATCTGTTTCCCGGAGCACCAAATCTGCGTGATTCGGACGTATTCAGAATGGGTTATAGATGGGGAGTATGATTGGCCCCCTAAATGCTGCCAATGCCAAGCTGTTTTGGAGGAGGGGGATGGATCTCAAACTACTAGACTGGGTTGCTTACATGTTATCCACACAAATTGCTTGGTCTCACATATCAAGAGTTTTCCTCCACATACGGCTCCGGCTGGATATGCGTGTCCTACATGTTCCACATCGATATGGCCTCCCAAAAGCGTGAAAGATTCTGGATCTCGTCTTCATTCCAAGTTGAAGGAAGCTATCATGCAGACTGGTATGGAAAAGAATATCTTTGGAAATCATCCAGTTTCATTGTCAGTGACAGAATCTCGTAGTCCTCCACCTGCTTTTGCTTCAGAGCCGTTGATTGGTAGGGAAAATCATGGAAACTCAGACTCACCTGCAACTGGGTCAGAACCTCCTAAACTTTCAGTGACAGATATTGTGGAGATAGAAGGTGCCAATTCAGCAGGAAATTTCGTGAAAGGCTCAAGTCCTGTTGGTCCTGCCACAAGGAAGGGCGCATTCAATGTTGAGCGACAGAACTCTGAAATCTCATACTATGCTGATGATGAAGATGGGAATCGTAAAAAGTATACAAAAAGAGGTCCGTTCTACCACAAGTTTCTTAGAGCATTGCTTCCTTTCTGGTCTAGTGCTTTACCTACTCTACCAGTGACTGCACCTCCAAGGAAAGATGCATCAAATGCAACCGAAGGCTCAGAAGGCCGTACACGACATCAAAGATCATCAAGGATGGACCCCAGAAAGATTCTTCTCCTGATTGCAATTATGGCGTGCATGGCGACTATGGGTATATTGTATTACAGACTAGTGCAACGGGGTCCAGGGGAAGAGCTTCCTAATGAAGAACAAATTTGA 1005 0.4527 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVIRTYSEWVIDGEYDWPPKCCQCQAVLEEGDGSQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYACPTCSTSIWPPKSVKDSGSRLHSKLKEAIMQTGMEKNIFGNHPVSLSVTESRSPPPAFASEPLIGRENHGNSDSPATGSEPPKLSVTDIVEIEGANSAGNFVKGSSPVGPATRKGAFNVERQNSEISYYADDEDGNRKKYTKRGPFYHKFLRALLPFWSSALPTLPVTAPPRKDASNATEGSEGRTRHQRSSRMDPRKILLLIAIMACMATMGILYYRLVQRGPGEELPNEEQI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0443 334 SUPERFAMILY RING/U-box 53 111 - -
Lja5g0443 334 MobiDBLite consensus disorder prediction 198 217 - -
Lja5g0443 334 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 332 IPR039043 -
Lja5g0443 334 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Lja5g0443 334 MobiDBLite consensus disorder prediction 145 183 - -
Lja5g0443 334 MobiDBLite consensus disorder prediction 278 293 - -
Lja5g0443 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 142 IPR013083 -
Lja5g0443 334 MobiDBLite consensus disorder prediction 266 293 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0443 - - gmx:100805734 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0443 5 3886820 3891295 Lja5g0443 5 3886820 3891295 ECH