Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0438 ATGGTGGCTGCCATTTCTGAACACCCATTGAGCTCCTCACGGCAGCAACAACAACAGCAAATACCTTCAGAGAGCAACAATGGCGGCAGCATACCCAGAAGAGGTAAAGGGAGGCAAGTTTCTTCCAGGTACATGTCTCCTTCACCTTCACCTTCACCTTCAACAACAACAACAACGACGTCTTCTTCTTCTACAACAACGACGACAACAACGACAACCTCTTCTTCTTCACGGCGATTTCCATCCCCTCTTCTCTCACACTCCACCAATTCCGCAACCCCACTTGCTCAAAAGCGCTCGCAATCGGTGGACCGCCGGAGAATCCGACCCATTACTCCAGTTCCTGAGGCAACGAAGCTTCTGGTGACTTCCACTCGGAGCTTGTCCGTTTCGTTTCAGGGAGAGGCTTTTTCGCTACCCATTAGCAAGAGTAAGGCGAAGGCGGCGACGCCGGAGCGGCGGAGGGCGTCTTTGGTTGCTGGGAAAGGAGGGGATCAGGGAGAGAAGTCTGAGAATTCTCGTCCGGCGGATCAGCATCGGTGGCCGGGGAGGTCCCGGCAGGCTAATAGCCTCTCCAGGAGTGTGGATTGCAGTGGTGGTGGTGGTGATGGGGATAAGAAGAGGGTTGTTGTTGGGAATGGATTGGGGAAAGTGGCACGTGCGTTGCAGCAGTCTATGGAGATGAAGAGTGGTGGTGGTGGAAGAAGGGCTTCTTTTGATGGGTTAAGGGGTATGAGTTTTGATTTGGGCAAAGCTGAGTTGCTTAAGGGTGCTTCTCAAGCTCAAGCTCAACTCAATAGTGAGCCTTGTTTGCCTTGTGATCTCACTGCTTCTGATACTGATAGTGTTTCCTCTGGTAGCACTTCAGGTGCACAAGACTGTGTTGGGGCTTCTAAGGCTTCAAGGGAGCCTCGTGGCATTGTTGTGTCTGCCAGGTTTTGGCAGGAAACTAATAGCCGCCTGCGCCGCTTGCAGGACCCTGGTTCTCCCTTGTCGACCAGCCCTGCTTCGAGAAGCTCTATCTCATCAAAGAATGTTCCATTGAAAAGGTATAACTCTGATGGTCCGATGTTGTCCCCTCGAACCATGGCTTCTCCGATTAGGGGAAACGCGCGCCCTGCTTCGCCGAGTAAACTTTGGGCATCTGCATCATCATCACCATCAAGGGGGTTTTCTAGCCCTGCTAGGGTGAGGAGTGCAGTTGCTAGCTCTATCAATAGTGGTTCTAGTAACACACCTTCAATTCTTAGCTTCTCTGCTGATGTGCGGAGAGGGAAGATAGGGGAAGATCGAATATTTGATGCACATGCCTTGAGGCTTCTGTATAACCGGTATGCTCAATGGCGGTTTGTTAATGCAAGGGCAGATGCTACATTTATGGTGCAGAAGCTGAATGCAGAGAGACATTTGTGGAATGCATGGGTAACTATTTCCGAGCTTCGGCATTCAGTCATACTTAAAAGAATCAAGCTGTTATTGCTGAGGCAAAAGTTGAAGCTAACCTCCATCCTAAAGGGGCAGATTTCTTATTTGGAAGAATGGGCGCTTCTAGATAGAGATCACACCAGTTCTTTGCTTGGAGCAACTGAAGCTTTGAGGGCCAGTACCCTGCGTCTTCCGGTCGTTGAAAAAGCAACAGCTGATGTTCCAAATCTAAAGGATGCTTTGCGGTCAGCAGTTGATGTGATGCAGGCAATGGCATCCTCAATATACACTCTTTCATCAAAGCAGGTGGAAGAAACTAATTGCTTGGTGGCGGAAATCCTAAAGGTGACCTCAAAGGAAAGGTTTTTGCTTGAACAATGCAATGATTTTTTATCATCGCTAGGAGCCATGCAGGTCAAGGATTGTAGCTTAAGAACGCATATGTTACAACTTTCTCGCGCACCGACTTCCAGCTCCCTGACAACACGTGTGTAG 1920 0.4964 MVAAISEHPLSSSRQQQQQQIPSESNNGGSIPRRGKGRQVSSRYMSPSPSPSPSTTTTTTSSSSTTTTTTTTTSSSSRRFPSPLLSHSTNSATPLAQKRSQSVDRRRIRPITPVPEATKLLVTSTRSLSVSFQGEAFSLPISKSKAKAATPERRRASLVAGKGGDQGEKSENSRPADQHRWPGRSRQANSLSRSVDCSGGGGDGDKKRVVVGNGLGKVARALQQSMEMKSGGGGRRASFDGLRGMSFDLGKAELLKGASQAQAQLNSEPCLPCDLTASDTDSVSSGSTSGAQDCVGASKASREPRGIVVSARFWQETNSRLRRLQDPGSPLSTSPASRSSISSKNVPLKRYNSDGPMLSPRTMASPIRGNARPASPSKLWASASSSPSRGFSSPARVRSAVASSINSGSSNTPSILSFSADVRRGKIGEDRIFDAHALRLLYNRYAQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLLLLRQKLKLTSILKGQISYLEEWALLDRDHTSSLLGATEALRASTLRLPVVEKATADVPNLKDALRSAVDVMQAMASSIYTLSSKQVEETNCLVAEILKVTSKERFLLEQCNDFLSSLGAMQVKDCSLRTHMLQLSRAPTSSSLTTRV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0438 639 PANTHER AUGMIN FAMILY MEMBER 22 637 - -
Lja5g0438 639 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 22 637 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 1 111 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 377 393 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 8 32 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 320 393 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 167 181 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 278 301 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 320 349 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 143 209 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 41 99 - -
Lja5g0438 639 MobiDBLite consensus disorder prediction 278 295 - -
Lja5g0438 639 Pfam QWRF family 282 600 IPR007573 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0438 Lja-Chr5 3815485 3822096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0438 - - gmx:100808920 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0438 5 3815485 3822096 Lja5g0438 5 3815485 3822096 ECH