Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0435 ATGGGTAGTTCTTTTCTTAAGAATCCCATCAAGTTTTCCCATGTCATGAACCGTGTCATTGATCCTTACAAAGTGCAGTCTAAACCTTACTTTCGATTACCGCATTTCCTGAGGAAGCCTAGAGAATATCAAGTGTCATCACCGTCTTTGTTCACTTCTTCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCAACCACCGCCGCCGCCTCCGCCTCCAAGGTTGGTTTTGTAGGTTGGTATTTGGGAATGATCAAAGCCCGGCCCATTCTCACCAAAAGTGTTACTTCTGCACTTATTTACACTGCTGCTGATTTATCCTCCCAGGCTATTGTGCGGCAATCTTCAGAACCTTTTGATTTCGTAAGAACTTTACGCATGGCGGGATATGGGATGATCATCTTAGGACCAACACTGCATTTCTGGTTCAATTTCATGTCAAAGCTTTTCCCAAGGACGGATCTTTTCTCTACATTGATGAAAATGGTCATGGGTCAGACACTTTATGGACCTGCCATGACTGTTATTTTCTTCTCATTTAATGCGCATTTGCAGGGTGAAACTGGCACGGAGATTGTAGCACGCTTAAAGCGGGATTTGCTTCCTACGTTTTTGAGTGGCGTTATGTACTGGCCTTTGTGTGATTTTATTACTTTCAGATTCATTCCTGTCCATTTACAGCCATTAGTCAGCAATTCATTTTCATATTTGTGGACCATTTACATCACCTATATGGCAAGCCTAGAGAAAGCTGAGATAGCAGAGATAGCTAGCTGA 774 0.4238 MGSSFLKNPIKFSHVMNRVIDPYKVQSKPYFRLPHFLRKPREYQVSSPSLFTSSFSSSSSSSSSTTAAASASKVGFVGWYLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLHFWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDLLPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMASLEKAEIAEIAS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0435 257 PANTHER OS12G0508100 PROTEIN 16 252 - -
Lja5g0435 257 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 16 252 IPR007248 GO:0016021
Lja5g0435 257 Pfam Mpv17 / PMP22 family 183 241 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0435 Lja-Chr5 3798904 3802362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0435 26 249 Miscellaneous Gene Families AT2G14860 64.286 2.89e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0435 K13348 - gmx:100810534 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0435 5 3798904 3802362 Lja5g0435 5 3798904 3802362 ECH