Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0433 ATGGCTCCTTTCCTCTCCCTCTCTGTGATTTTTCTCCTCCTCCAATTTCCCTTCCTATCCCTCTCAACCAATCCTGAAGGAAATGCTCTGCATGATTTGAGAAGCAGGCTTTCTGACCCCAACAACGTGCTTCAGAGTTGGGACCCTACTCTGGTTAATCCCTGTACTTGGTTCCATGTTACCTGTAACTCCAACAATCATGTGATTCGCTTAGACTTAGGTAATGCTAATGTTTCTGGAACTCTGGGCCCAGAACTTGGCCAGCTTCATCATCTGCAGTACCTGGAGCTTTATAAGAATGACCTGAGAGGAAAGATCCCTAAAGAACTTGGAAACTTGAAAACACTCATCAGCATGGATTTGTATGACAACAAGTTTGAGGGGAAGATTCCAAAGTCATTTGGCAAGTTGAAGTCACTAAAATTCCTGCGGCTAAACAACAATGAGTTGTCGGGATCAATCCCGAGAGAACTCACTCATCTCCCCAATCTCAAAATCTTTGATGTTTCTAATAATGACCTCTGTGGAACAATACCAGTAGATGGAAACTTTGGGTCCTTCCCAATGGAAAGTTTTGAAAACAACAGACTCAGTGGTCCCGAGCTGAAAGGACTGGTACCATATGATTTTGGATGCTGA 639 0.4366 MAPFLSLSVIFLLLQFPFLSLSTNPEGNALHDLRSRLSDPNNVLQSWDPTLVNPCTWFHVTCNSNNHVIRLDLGNANVSGTLGPELGQLHHLQYLELYKNDLRGKIPKELGNLKTLISMDLYDNKFEGKIPKSFGKLKSLKFLRLNNNELSGSIPRELTHLPNLKIFDVSNNDLCGTIPVDGNFGSFPMESFENNRLSGPELKGLVPYDFGC* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0433 212 Gene3D Ribonuclease Inhibitor 23 204 IPR032675 -
Lja5g0433 212 SUPERFAMILY L domain-like 25 200 - -
Lja5g0433 212 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Lja5g0433 212 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 7 209 - -
Lja5g0433 212 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Lja5g0433 212 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0433 Lja-Chr5 3780429 3782582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0433 9 200 Receptor kinase-like Gene Family AT1G71830 59.799 3.75e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0433 - - gmx:100816279 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0433 5 3780429 3782582 Lja5g0433 5 3780429 3782582 ECH