Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0423 ATGGAAAAGAAACAGGGTTTCTTCTCCGCTCTCAAACACGAGGTAGTTCGCGGCCTCTCACCTTCCCGTTCCCGTTCCACCAGCCCCGCCCGAACCGCCTCACCCATCTCCACCCTCCTCCGGAGGAAAAAACACCTCGCCGCCCCCACCCTTGACTCCTCCGTCGCGAGATCCGGCAGCCTGAGGCCGCTAGGAGAGACTCTAACGCCTCTCATGGAGGGACCTGACCAGGAAAACGGGGACCCCAAACGGGTCGGGTCGGGTCTCGGAAACTGGATGAAGGGTCAGCTGTCTCGTACCCCCTCCGTCTCGTACAAGAGGTCTGATCTGAGGCTTCTGCTTGGTGTCATGGGTGCGCCGCTGGCTCCGCTTCATGTCTGCTCCACCGACCCTTTGCCTCATCTCAGCATTAAGGACACACCCATCGAAACTTCATCTGCACAGTATATATTGCAGCAGTACACTGCTGCATCTGGAGGGCAGAAGTTGCAGAACTCTATAAAAAATTCATATGCAATGGGAAAGGTTCGAATGGTAGCTTCTGAGTTCGAAACTGCGACAAGGGTAGTGAAGAATCGGAATGTTTCTAGGTGTGCAGAGTCTGGTGGATTTGTGCTGTGGCAGATGAATCCTGACATGTGGTATGTAGAGCTTGCAGTTGGGGGCAGCAAGGTTCATGCTGGCTGCAATGGAAAGCTTGTCTGGAGGCACACACCTTGGCTAGGTGCTCACACAGCAAAGGGACCTGTGAGGCCTTTGCGGCGTGCACTTCAGGGTCTTGACCCTAGAACCACCGCCAGTATGTTTGCTGATTCTAGATGCATTGGAGAGAAGAACATCAATGGTGAGGATTGCTTCATCCTTAAGCTCTGTACTGATCCTGAAACATTGAAGGCTCGGAGCGAGGGCCCTGCTGAGATCATAAGGCATGTGTTATTTGGCTACTTTAGCCAAAAGACCGGACTGCTTGTTCACATTGAGGATTCTCATCTGACCCGCATCCAAACTAATGGAGGTGATGCGGTTTATTGGGAAACCACAATCAATTCATTCCTTGATGACTACAGGCCTGTGGAAGGGATCATGATTGCCCACTCAGGGCATTCTGTGGTAACTCTGTTCAGGTTTGGGGAGATGGCCATGAGCCACACTAAAACCAGAATGGAAGAAGCTTGGACGATTGAAGAAGTCGCGTTCAACATTCCTGGCCTCTCTGTAGATTGCTTCATTCCCCCAGCTGATCTGAGTACAGGTTGTATCAGTGAAGCCTGTGAACTCCCTCAGAATGAAAAAGCAAAGAACTCACTAGCAGGACACCGGACCAAGGTTGTTGCCCTGGAGAAACAGCATAATTGCAACATTGATAACATGATGTGGAACATGGAAATCTAA 1392 0.5136 MEKKQGFFSALKHEVVRGLSPSRSRSTSPARTASPISTLLRRKKHLAAPTLDSSVARSGSLRPLGETLTPLMEGPDQENGDPKRVGSGLGNWMKGQLSRTPSVSYKRSDLRLLLGVMGAPLAPLHVCSTDPLPHLSIKDTPIETSSAQYILQQYTAASGGQKLQNSIKNSYAMGKVRMVASEFETATRVVKNRNVSRCAESGGFVLWQMNPDMWYVELAVGGSKVHAGCNGKLVWRHTPWLGAHTAKGPVRPLRRALQGLDPRTTASMFADSRCIGEKNINGEDCFILKLCTDPETLKARSEGPAEIIRHVLFGYFSQKTGLLVHIEDSHLTRIQTNGGDAVYWETTINSFLDDYRPVEGIMIAHSGHSVVTLFRFGEMAMSHTKTRMEEAWTIEEVAFNIPGLSVDCFIPPADLSTGCISEACELPQNEKAKNSLAGHRTKVVALEKQHNCNIDNMMWNMEI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0423 463 Coils Coil 429 449 - -
Lja5g0423 463 Pfam Protein of unknown function (DUF620) 171 412 IPR006873 -
Lja5g0423 463 MobiDBLite consensus disorder prediction 20 35 - -
Lja5g0423 463 MobiDBLite consensus disorder prediction 16 93 - -
Lja5g0423 463 PANTHER LIPASE 1 462 IPR006873 -
Lja5g0423 463 PANTHER LIPASE 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0423 Lja-Chr5 3735205 3738172 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0423 - - gmx:100813032 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0423 5 3735205 3738172 Lja5g0423 5 3735205 3738172 ECH