Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0420 ATGGATAAGGGAAAGATCCAAGAGGTGATCGAGAAGCAAGTCCTCACGGTGGTTCAAGCCGTCGAGGACAAGATCGACGATGAGATCTCCGCCCTCGACCGCCTCGACTCCGACGATCTCGAATCCCTCCGTGAGCGCCGCCTTCACCAGATGAAAAAGATGGCCGAGAAGCGTAACCGTTGGATCTCCCTCGGACACGGCGATTACTCCGAGCTTCCCTCCGAGAAAGACTTCTTCTCCGTTGTCAAGGCCAGTGATCGCGTCGTCTGCCATTTCTTCCGCGAAAATTGGCCCTGCAAGGTTGCAGACAAGCATTTAGGCGTGTTGGCAAAGCAGCATATCGAAACTCGTTTTGTGAAGATTAATGCTGAAAAAAGTCCGTTTTTGGCTGAGAAGCTCAAGATCACTGTTCTTCCAACTCTTGCCCTCATAAAGAATGCCAAAGTGGATGATTATGTGGTGGGATTTGATGAACTTGGTGGAACTGATGATTTTAGCACCGAGGATTTGGAAGAAAGATTAGCTAAAGCTCAAGTCATCTTTTTGGAGGGTGAATCATCAATTCATCAAGCAAGGTCCACTGCACAATCCAAAAGAAGTGTTCGGCAGGCCACAAGGGCAGATTCATCAGATTCAGAGTAA 642 0.486 MDKGKIQEVIEKQVLTVVQAVEDKIDDEISALDRLDSDDLESLRERRLHQMKKMAEKRNRWISLGHGDYSELPSEKDFFSVVKASDRVVCHFFRENWPCKVADKHLGVLAKQHIETRFVKINAEKSPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTEDLEERLAKAQVIFLEGESSIHQARSTAQSKRSVRQATRADSSDSE* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0420 213 Gene3D Glutaredoxin 49 181 - -
Lja5g0420 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 213 - -
Lja5g0420 213 MobiDBLite consensus disorder prediction 191 213 - -
Lja5g0420 213 CDD Phd_like_TxnDC9 65 175 - -
Lja5g0420 213 Pfam Thioredoxin 75 155 IPR013766 -
Lja5g0420 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 213 - -
Lja5g0420 213 Coils Coil 18 38 - -
Lja5g0420 213 Coils Coil 40 60 - -
Lja5g0420 213 SUPERFAMILY Thioredoxin-like 5 177 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0420 Lja-Chr5 3715528 3717290 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0420 - - gmx:100812734 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0420 5 3715528 3717290 Lja5g0420 5 3715528 3717290 ECH