Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0413 ATGGAAGATGCGGAATGGGTTCTGGTGCAGCGCCCCCCACAGAAAGACTGGTGGAACCCGACTTCAGCCAATGCAGTGGGTGATGGACCTTCTAGACCCTTGAAGGTTACTTTTTCTGGGCCTGCAAAGCACTGGACCGATGCCATCCCCATTGGCAATGGCCATCTTGGAGCCATGGTTTGGGGTGGCGTGCAATCGGAAATTCTCCAGCTCAATGAGGACACACTTTGGACTGGGATTCCTGGCGATTACACAAAAAAAACTGCTCCTGAAGCGCTGGCTGAAGTTCGAAAACTTGTTGATGATAGAAAATACTCTGAAGCTACGGCAGCAGCTGTCAAGTTGTCAGGAGATCCTTCTGATGTATACCAACTTATTGGGGACATCAAGTTGGAATTTGATGATTCTCATCTTAAATATTCAGAAGAGTCTTATCGTAGAGAGCTCGATTTGGATAATGCAACAGTGAAAGTAAAATATTCTGTTGGTGATGTAGAATTTTCCAGAGAACATTTTGCTTCTAATCCAGATCAAGTGATAGTGGCAAGGTTTTCTGCAAGCAAGTCAGCGTCATTATCATTTACAGTGTCTTTGGATAGCAAATTACATGACAATTTACGGGTAAATGGCCAAAATCAGATAATAATGGAAGGAAGTTGTCCTGGTTCTAGGATCAGGCCAAAAGTGAATTCTAATGACCCTCCAAAAGGAATTCAATTTTCTGCAGTTCTTGATATACAAATTAGTAATGACAAAGGGGTTATACATGTCTTGGATGATAAGAAGCTAAGAGTTGAAGGTTCAGATTGGGCTATTTTACTTCTGACAGCTTCTTCTTCTTTTGATGGCCCATTTACTAAGCCTGAAGACTCTAAGAAAGATCCCACATCTGAGTCCCTTAGTAAGATGAAGTCTGTGAAAAGTGTTTCATATGCCGATCTTTATGCACGTCACTTGGATGACTATCAGAATCTATTTCATCGTGTCTCATTGCAACTCTCTAAAAGCTCAAAGAATGTTTTAGGAAAATCTGTTTTGGACGAAAGGAAATTGGTTTCCCCTCAAACTAACATCTCTCAAATGGGAGGTGATGAAACCATTCCAACTTCAGCAAGAGTCAAATCATTTCAAACTGACGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTACTAATTTCTTGTTCACGTCCTGGAACTCAGCCGGCAAACTTACAGGGTATATGGAACAAAGATCTCGAGCCTGCATGGGATGGTGCTCCTCACACTAATATTAATCTTCAAATGAATTATTGGCCGTCTCTGTCTTGCAACCTACACGAATGCCAAGAGCCGTTATTTGATTTCATTTACTCTTTGTCAGTCAATGGTAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGTGCATCAAGTTTCTGACATATGGGCCAAAACATCCCCAGATCGAGGTGAGGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTGTTGCCATCTATGGGAGCATTATACTTATACAATGGACAAAGGTTTTCTCAAAAATAAAGCATATCCTTTGTTGGAAGGATGTACATCATTTTTGCTGGATTGGTTGATTCAAGGCCATGATGGATTGTTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGATCAAAAGCCTGCTAGCGTAAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTATTCTCCATAATCATATCTGCTGCTGAGGTTCTGGGAAGACAAGATGATGCTATTATCAAAAGAGTTACCGAGTCTCTGCCTAAGCTCCCTCCAACAAAAATCTCTAGGGATGGATCCATTATGGAATGGGCAGAAGATTTTCAGGACCCAGATATACATCATAGACATGTTTCCCATCTGTTTGGCCTGTTTCCAGGACACACAATCAGTCTTGAGAAAACTCCAGACCTTTGTAAAGCTGTGGATTATAGTCTAATTAAAAGAGGGGATGAAGGTCCAGGGTGGTCAACAACTTGGAAAGCTTCATTATGGGCTCACCTTCACAACAGTGAGCATGCATATCGCATGATAAAGCACTTGATCGTTTTGGTAGACCCTGAACATGAAAGTGATTACGAAGGAGGACTTTACAGTAACCTGTTCACAACACATCCCCCTTTCCAGATTGATGCAAACTTTGGGTTTTCAACAGCAATTGCAGAAATGCTTGTTCAAAGCACACTGAAGGACCTCTACTTGCTTCCCGCACTACCTCGCGGAAAATGGGCAAATGGTTGTGTAAAAGGATTAAAAGCACGTGGTGGCGTGACAGTCAACATCTGCTGGAAAGAAGGAGATCTGCGTGAAGTGGGGCTTTGGTCAGAAAACCAGAATTCCCGAGTGAGACTACATTATAGAGGAACCATGGTCTTAGCAAATTTATCACCTGGCAGAGTTTACTCATATAATAACCAGTTGAAGTGTGTGAAGACATACTCACTTAGCCAACTGAGTCTTTGA 2535 0.4205 MEDAEWVLVQRPPQKDWWNPTSANAVGDGPSRPLKVTFSGPAKHWTDAIPIGNGHLGAMVWGGVQSEILQLNEDTLWTGIPGDYTKKTAPEALAEVRKLVDDRKYSEATAAAVKLSGDPSDVYQLIGDIKLEFDDSHLKYSEESYRRELDLDNATVKVKYSVGDVEFSREHFASNPDQVIVARFSASKSASLSFTVSLDSKLHDNLRVNGQNQIIMEGSCPGSRIRPKVNSNDPPKGIQFSAVLDIQISNDKGVIHVLDDKKLRVEGSDWAILLLTASSSFDGPFTKPEDSKKDPTSESLSKMKSVKSVSYADLYARHLDDYQNLFHRVSLQLSKSSKNVLGKSVLDERKLVSPQTNISQMGGDETIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGTQPANLQGIWNKDLEPAWDGAPHTNINLQMNYWPSLSCNLHECQEPLFDFIYSLSVNGSKTAKVNYEANGWVVHQVSDIWAKTSPDRGEAVWALWPMGGAWLCCHLWEHYTYTMDKGFLKNKAYPLLEGCTSFLLDWLIQGHDGLLETNPSTSPEHMFTAPDQKPASVSYSSTMDISIIKEVFSIIISAAEVLGRQDDAIIKRVTESLPKLPPTKISRDGSIMEWAEDFQDPDIHHRHVSHLFGLFPGHTISLEKTPDLCKAVDYSLIKRGDEGPGWSTTWKASLWAHLHNSEHAYRMIKHLIVLVDPEHESDYEGGLYSNLFTTHPPFQIDANFGFSTAIAEMLVQSTLKDLYLLPALPRGKWANGCVKGLKARGGVTVNICWKEGDLREVGLWSENQNSRVRLHYRGTMVLANLSPGRVYSYNNQLKCVKTYSLSQLSL* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0413 844 Gene3D - 271 748 IPR012341 GO:0005975
Lja5g0413 844 PANTHER ALPHA-L-FUCOSIDASE 2 1 841 - -
Lja5g0413 844 Pfam Glycosyl hydrolase family 65, N-terminal domain 38 283 IPR027414 -
Lja5g0413 844 PANTHER - 1 841 - -
Lja5g0413 844 SUPERFAMILY Six-hairpin glycosidases 293 801 IPR008928 GO:0005975
Lja5g0413 844 PIRSF UCP007663 17 842 IPR016518 GO:0004560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0413 Lja-Chr5 3671556 3677689 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0413 K15923 - gmx:100810387 1466.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0413 5 3671556 3677689 Lja5g0413 5 3671556 3677689 ECH