Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0408 ATGACCATGCATATCCTCTGTTTGTTAATGTTCCTAACTGCAATGCAGGGAACTAAGGCAGTTGATTACACTGTCACCAACAACGCCCTCACAACTGCCGGTGGAGCGCGTTTTCGAGACCAAATCGGAGCAGAATACGCGAAGCAAACACTGGACTCTGCAACCCAATTCACATGGAGGGTGTTCCAGCAGAACACCCCTGCTGACAGAAGAAACGTGCAGACTGTGAGCTTATTTGTGGATGACATGGATGGTGTTGCATATACAACTCCAAGCAACAGCCAGATTCATCTCAGCGCTAGGTACGTTAACAGCTATAGCGGCGATTTGAAGAGGGAAATCACAGGGGTGTTGTATCATGAAATAGTCCATGTTTGGCAGAATGGGATTGGAAGTGCTCCTGGTGGGTTGATTGAAGGGATTGCAGATTATGTGAGGCTGAAGGCAAACTATGCACCTAGTCACTGGGTTAAACCTGGGCAAGGAAATAAATGGGACCAAGGTTATGATGTCACAGCTCAGTTTCTGGACTATTGTAACAGTCTCAAAAATGGGTTTGTGGCTGAGATGAACAAGTTGCTGAGTAATGGTTATAGTGATCAGTACTTTGTTCAGCTACAGGGGAAGAATGTTGATCAGCTGTGGACAGATTACAAGGCCAAGTATGGCAATATTGCCTAG 681 0.4596 MTMHILCLLMFLTAMQGTKAVDYTVTNNALTTAGGARFRDQIGAEYAKQTLDSATQFTWRVFQQNTPADRRNVQTVSLFVDDMDGVAYTTPSNSQIHLSARYVNSYSGDLKREITGVLYHEIVHVWQNGIGSAPGGLIEGIADYVRLKANYAPSHWVKPGQGNKWDQGYDVTAQFLDYCNSLKNGFVAEMNKLLSNGYSDQYFVQLQGKNVDQLWTDYKAKYGNIA* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0408 226 PANTHER - 3 222 IPR007541 -
Lja5g0408 226 PANTHER BASIC SECRETORY PROTEASE 3 222 - -
Lja5g0408 226 Pfam Peptidase of plants and bacteria 19 218 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0408 Lja-Chr5 3648097 3648966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0408 - - gmx:100499938 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0408 5 3648097 3648966 Lja5g0408 5 3648097 3648966 ECH