Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0407 ATGGCTTTCTCCGAATTCCGACCACTCGATGACAAGTCTCTGATCGAATACATTAAGGCTGTCCCTGCCCTCTCTTCCATCCTAGGCAACAACTTCTCCGACTTGTCTGTCAAAGAAGTCGGAGATGGCAACCTTAACTTTGTCTTCATTCTCCTCAACTCCTCTGGTTCTCTTGTCATCAAACAGGCTCTGCCTTATGTTCGTTGCATAGGGGAATCATGGCCGATGACGAAGGAGAGAGCATATTTTGAGTCTATGGCTTTGAAAGAAGAGTCTCGGTTGTGCCCTGAGCATGTCCCTCAAGTGTATCACTTTGACCGTACCATGTCTTTGATTGCTATGCGTTACATTGAGCCTCCACATATAATTCTTAGGAAAGGGTTGATTGCTGGGATTGAGTATCCTTTGCTGGCTGAGCATATGGCTGATTTCATGGCTAAGACACTCTTCTTTACTTCTCTCCTTTTCCGCACCACTGCTGATCACAAACGGGACGTTGGCGAATATTGTGGGAATGTGGAGTTATGCAGGCTCACTGAACAGGTTGTTTTCTCTGATCCTTACAAAGTTTCTGAATATAATCGTTGGACTTCCCCTCATCTCGATAGTGATGCGGAGGCTGTTCGGGAAGACAATTTGCTGAAGCTTGAAGTTGCTGAGCTCAAATCTAAGTTCTGTGAGAGGGCTCAGGCACTAATACATGGAGATCTACACACTGGTTCTGTGATGGTAACTCCTGAATCAACACAAGTTATTGATCCAGAATTTGCATTCTATGGACCAATAGGGTTTGACATTGGAGCATTTTTGGGAAATTTGATTTTGGCTTTCTTCTCTCAAGATGGACATGCTGATCAAGCAAATGATCGAAAAGCATATAAAGAGTGGATTCTTAAGACAATTGAAGACACTTGGGATCTTTTCCACCAGAAATTCACTGCACTTTGGGATGAGCATAGAGACGGTGCTGGTGAGGCATATCTTCCAGCAATCTATAACAATCCTGAGGTCCAGCTGCTTGTACAGAAGAAATACATGACAGATTTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGTGTGGTACATGTTGCGGATTTTGAGTCAATTACTGATGCTGATAAACGGGCAAATTGTGAAAGGAGGGCGCTTAATTTAGCTAAGATGCTTCTCAAAGAAAGAAGAAAATTTGAAGGAATAGCTGAAATTGTTTCAGCAATCAGGGAATTCTAG 1254 0.4298 MAFSEFRPLDDKSLIEYIKAVPALSSILGNNFSDLSVKEVGDGNLNFVFILLNSSGSLVIKQALPYVRCIGESWPMTKERAYFESMALKEESRLCPEHVPQVYHFDRTMSLIAMRYIEPPHIILRKGLIAGIEYPLLAEHMADFMAKTLFFTSLLFRTTADHKRDVGEYCGNVELCRLTEQVVFSDPYKVSEYNRWTSPHLDSDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHTGSVMVTPESTQVIDPEFAFYGPIGFDIGAFLGNLILAFFSQDGHADQANDRKAYKEWILKTIEDTWDLFHQKFTALWDEHRDGAGEAYLPAIYNNPEVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVVHVADFESITDADKRANCERRALNLAKMLLKERRKFEGIAEIVSAIREF* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0407 417 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
Lja5g0407 417 PANTHER METHYLTHIORIBOSE KINASE 2 416 - -
Lja5g0407 417 Gene3D - 121 417 - -
Lja5g0407 417 SUPERFAMILY Protein kinase-like (PK-like) 5 416 IPR011009 -
Lja5g0407 417 PIRSF MTRK 1 417 IPR009212 GO:0009086|GO:0046522
Lja5g0407 417 PANTHER METHYLTHIORIBOSE KINASE 2 416 - -
Lja5g0407 417 Pfam Phosphotransferase enzyme family 37 276 IPR002575 -
Lja5g0407 417 TIGRFAM MTRK: S-methyl-5-thioribose kinase 38 412 IPR009212 GO:0009086|GO:0046522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0407 K00899 - gmx:100818359 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0407 5 3642207 3646634 Lja5g0407 5 3642207 3646634 ECH