Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0405 ATGCTGCTGACTTTGAGTTTGTGGACGATATTGTTCCTAACCGTCAATTTACTGTTCGGAAACACCATCGTCCACAGCTTCGACGGCGGCACTCACCCCAAAAAACAACTCACCCTCTGCCACGAATTCATTCTCCCCGCCGGTTACCCCTGCTCCGAATACACGACTCAGACGAAGGATGGTTTCTTGTTAGGTCTTCAGCGTGTCTCTTCTTCTCCTTCTTCTTCTTCTCTTCGCCGTGGCTATGCCGGAGAACGAGGCCCTCCGGTTCTGCTTCTGCATGGGCTATTCATGGCAGGTGATGCGTGGTTTCTAAATATGCCAGAGCAATCACTTGGCTTCATCCTTGCAGATCATGGTTTTGATGTCTGGGTAGGAAATGTGCGCGGAACGCGGTGGAGCCACGGGCATAAATCTTTATCAGAGAAGGATAAGGATTTTTGGGACTGGAGTTGGCAGGAATTAGCCCTCTATGATGTTCCTGAAATGGTCAATTATATTCATTCAGTAACAAACTCTAAGCTTTTTATAGTTGGGCATTCACAGGGGACAATTATCTCTTTAGCTGCTTTCACTCAACGGGAGATAGTAGAAAAGGTTGAAGCTGCAGCTCTTTTATCTCCAATATCATACTTGGATCACATCAGTGCACCTCTTGTACTTAGAATGGTTAAGATGCACCTTGATCAGATGATTCTTACCATGGGCGTTCATCAACTGAACTTCAAAAGCGAATGGGGAGCAAGTCTCTTGGTTTCCTTATGTGATACCCGTCTAAGTTGTAGTGACATGCTGTCATCCATTACAGGGAAGAATTGTTGCTTCAATGACTCACGCGTTGCTTTTTATCTTGAACAAGAACCTCATCCATCATCCTCCAAAAACTTGTGCCACCTTTTTCAAATGATCCGCAAAGGTACCTTCTGCAAGTACGATTATGGAAAGCTGAAAAATCTGATTGAGTATGGCAGTATCAAACCACCAAAATTCGACCTTAGCCGCATACCCAAATCATTGCCTCTCTGGATGGCTTATGGTGGAAATGATGCTTTAGCAGATATATCTGATTTCCAGCACACGCTTAAGGATTTGCAGTCCACCCCGGAGGTGGTTTATCTTGAAAACTATGGTCATGTTGACTTCATTTTAAGCTTGCAAGCAAAACAAGATCTTTATGACCCTATCATTAGTTTTTTCAAGTCATTTGGCAAATCTAGCAGCATTTAA 1227 0.4393 MLLTLSLWTILFLTVNLLFGNTIVHSFDGGTHPKKQLTLCHEFILPAGYPCSEYTTQTKDGFLLGLQRVSSSPSSSSLRRGYAGERGPPVLLLHGLFMAGDAWFLNMPEQSLGFILADHGFDVWVGNVRGTRWSHGHKSLSEKDKDFWDWSWQELALYDVPEMVNYIHSVTNSKLFIVGHSQGTIISLAAFTQREIVEKVEAAALLSPISYLDHISAPLVLRMVKMHLDQMILTMGVHQLNFKSEWGASLLVSLCDTRLSCSDMLSSITGKNCCFNDSRVAFYLEQEPHPSSSKNLCHLFQMIRKGTFCKYDYGKLKNLIEYGSIKPPKFDLSRIPKSLPLWMAYGGNDALADISDFQHTLKDLQSTPEVVYLENYGHVDFILSLQAKQDLYDPIISFFKSFGKSSSI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0405 408 PANTHER LYSOSOMAL ACID LIPASE-RELATED 28 401 - -
Lja5g0405 408 PIRSF Steryl_ester_lip 1 404 IPR025483 GO:0016788
Lja5g0405 408 PANTHER TRIACYLGLYCEROL LIPASE 1 28 401 - -
Lja5g0405 408 SUPERFAMILY alpha/beta-Hydrolases 40 400 IPR029058 -
Lja5g0405 408 Gene3D alpha/beta hydrolase 30 401 IPR029058 -
Lja5g0405 408 Pfam alpha/beta hydrolase fold 88 211 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0405 Lja-Chr5 3610456 3614977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0405 38 407 Acyl Lipid Metabolism Gene Families AT2G15230 61.892 5.49e-179 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0405 K01052 - gmx:100803830 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0405 5 3610456 3614977 Lja5g0405 5 3610456 3614977 ECH