Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0404 ATGGGGTCAGAGTCTCCACTTCACATCCTCCTTGTGTCTTTTCCGGCGCAAGGACACATAAACCCTCTTCTCCGGCTAGCCAAGTGCCTCGCCGCAAAGGGCTCCTCCGTCACCTTCGCCACCACACAAACCGCCGGCAAATCCATGCGAACCGCCACCAACATCACCGACAAAGCACCCACTCCAATCAGCGACGGTTCTCTCAAGTTCGAATTCTTCGACGACGGTTTAGGCCCGGACGATGATTCCATCAGAGGAAACCTCAGCCTCTACTTACAACAGCTCGAGCTTGTTGGGAGACAACAAATTCTAAAAATGATCAAGGAACATGCTGATTCAAACAGGCAAATTTCCTGCATCATAAACAACCCGTTTCTTCCATGGGTTGTTGATGTTGCAGAAGAACAGGGGATTCCTTCTGCTCTGCTTTGGATTCAATCCAGTGCTGTCTTCACCGCTTACTACAGCTATTTCCACAACCTTGTAACTTTCCCTTCCAAAGAAGACCCTCTTGCTGATGTTCAGTTACCTTCAACTTCAATAGTCCTCAAACACTGCGAAATCCCAGATTTTCTGCACCCTTCTTGTACATATCCATTTCTGGGCACACTCATCTTGGAACAGTTCAAGAACCTGAACAAAACATTCTGCATCCTGGTCGACACGTACGAGGAGCTAGAGCATGATTTCATTGACTATTTGTCAAAAACATTCCTCATCAGACCAGTGGGTCCTCTGTTCAAGAGCTCACAAGCAAAAAGTGCTGCAATCAGAGGCGATTTCATGAAGAGTGATGATTGTATTGAGTGGCTGAACTCAAAACCTCAATCATCTGTTGTGTATGTTTCCTTTGGGAGTATTGTGTACCTACCACAAGAACAAGTAGATGAAATTGCTTTTGGATTGAAAAAATCCCAGGTTTCGTTCTTATGGGTGATGAAGCCACCGCCAGAGGTAACGGGGCTTCAACCACACGTTCTTCCATATGGGTTTTTGGAGGAAACTGGTGAGAGAGGGAGAGTGGTGCAGTGGAGCCCACAAGAGGAGGTTCTAGCTCACCCTTCAGTGTCCTGTTTTCTGACACATTGTGGGTGGAACTCTTCCATGGAAGCTCTTACATCAGGGGTGCCGGTGCTGACTTTTCCGGCGTGGGGAGACCAGGTGACAAACGCGAAGTTTCTGGTGGATGTTTTCCAGGTGGGGCTCCGATTGGGGTATGGGCAGGTTGAGAATAAGAGAGTGATCAGCAGGGATGAGGTGGAGAAGCGGTTGTTGGAGGTGACAACAGGGGAAAAAGCAGAGAAGTTGAAGAGGAGTGCGTTGAAGTGGAAGATGGCGGCGGAGGCTGCGGTGGCCGGCGGTGGAACCTCCGATAGGCACCTTGATGCATTCATGGATGATATCAAGAGACGTGGCTCTGTTAATGGTCAAAGGGCGTAA 1440 0.4882 MGSESPLHILLVSFPAQGHINPLLRLAKCLAAKGSSVTFATTQTAGKSMRTATNITDKAPTPISDGSLKFEFFDDGLGPDDDSIRGNLSLYLQQLELVGRQQILKMIKEHADSNRQISCIINNPFLPWVVDVAEEQGIPSALLWIQSSAVFTAYYSYFHNLVTFPSKEDPLADVQLPSTSIVLKHCEIPDFLHPSCTYPFLGTLILEQFKNLNKTFCILVDTYEELEHDFIDYLSKTFLIRPVGPLFKSSQAKSAAIRGDFMKSDDCIEWLNSKPQSSVVYVSFGSIVYLPQEQVDEIAFGLKKSQVSFLWVMKPPPEVTGLQPHVLPYGFLEETGERGRVVQWSPQEEVLAHPSVSCFLTHCGWNSSMEALTSGVPVLTFPAWGDQVTNAKFLVDVFQVGLRLGYGQVENKRVISRDEVEKRLLEVTTGEKAEKLKRSALKWKMAAEAAVAGGGTSDRHLDAFMDDIKRRGSVNGQRA* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0404 479 Gene3D Glycogen Phosphorylase B; 12 461 - -
Lja5g0404 479 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Lja5g0404 479 Gene3D Glycogen Phosphorylase B; 256 449 - -
Lja5g0404 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 469 - -
Lja5g0404 479 CDD GT1_Gtf-like 7 438 IPR002213 GO:0008194
Lja5g0404 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 396 IPR002213 GO:0008194
Lja5g0404 479 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 472 - -
Lja5g0404 479 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0404 Lja-Chr5 3604269 3607710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0404 3 468 Glycosyltransferase AT4G15480 52.137 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0404 - K23279 gmx:100804361 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0404 5 3604269 3607710 Lja5g0404 5 3604269 3607710 ECH