Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0403 ATGACTTCTTCTGAGAGCAGAGCAGAGGAGCTTCACGTTATGCTGGTGGCGTTTTCCGCCCAAGGCCACATCAACCCTTTACTCCGGCTAGGCAAAAGCCTCCTAGCCAGAGGCCTCCAAGTCACCCTCGCCACCACTGAACTAGTCTACCACCGTGTGTTCAAATCCTCCTCCACCACCGCCGCCACAACCGACACCATCCCCACCAATTTCACCACCAATGGAATCCACGTCCTGTTCTTCTCCGACGGCCTTGACCCCAACCCAGATCAAACACAGTTAACCCCTGATGATTACATGGCCCTTGTAGAAAATCTTGGACCAATCAACCTCTCAACTCTCATCAAAACCCACTTCATCAACAATTCCAAAAAGCTTGCTTGCATCATCAACAACCCTTTTGTCCCCTGGGTTGCAGATGTAGCAGCAGAGTTCAAAATCCCCTGTGCATGTCTCTGGATTCAACCATGTGCTCTCTACGCCATCTATTACCATTTCTACAACAACACCAACCAATTCCCCACACTTGAGAATCCAGAATTGAATGTCCAATTACCAGGTCTACCATTGCTGAAACCTCAAGACCTTCCATCTTTTATTCTCCCAACAAACCCCTTTGGAGCCTTATCAAAAGTACTAGCAGATATGCTCAAAGACATGAAGAAATTGAAGTGGGTGTTGGCGAATTCGTTCTATGAACTGGAGAAGGAAGTCATAGATTCAATGGCAGAGACATACCCTGTCATACCTGTTGGTCCGTTACTTCCTCTGTCGCTTCTCGGCGTAGATGAAAACGAAGATGTTGGAATTGAAATGTGGAAGCCACAGGATTCATGCTTAGAGTGGCTCAACGATCAACCTCCATCTTCGGTTATCTACATCTCATTCGGAAGCTTAATTGTGTTGTCTGCTAAGAAATTGGAGAGCATTGCTACTGCTCTGAAGAACAGTAACTGCAAATTTCTGTGGGTGATCAAGAAACAAGATGGAAAAGACTCGCTTCCCCTGCCTCAGGGGTTCAAGGAAGAGACGAAAAACAGGGGAATGGTGGTGCCATGGTGCCCACAAACGAAGGTGTTGGTTCACCCTGCGATTGCATGCTTCCTGACACACTGTGGATGGAATTCAATGCTGGAAGCAATCGCCGCCGGGAAACCGATGATTGCGTATCCTCAGTGGACTGATCAACCCACCAACGCGAAGCTCGTTTCTGATGTTTTCCGTGTTGGGATTCGCTTGGAGCAAGACAGTGATGGGTTTGTGGAAACAGGGGAACTGGAAAGAGCAATTGAAGAGATTGTTTCGGGGCCTAAGTCAGAGGAGTTGAAGAGGAATGCGGCGGAGCTGAAACGTGCTGCGAGGGAGGCGGTGGCTGATGGTGGCTCGTCGGACCGGAATATCCAGACATTTGTGGATGAAATTCTTGCAACTAGATTGGATGTCATGGAATCTTCGAACGAGGTCAACAAGTGA 1473 0.4827 MTSSESRAEELHVMLVAFSAQGHINPLLRLGKSLLARGLQVTLATTELVYHRVFKSSSTTAATTDTIPTNFTTNGIHVLFFSDGLDPNPDQTQLTPDDYMALVENLGPINLSTLIKTHFINNSKKLACIINNPFVPWVADVAAEFKIPCACLWIQPCALYAIYYHFYNNTNQFPTLENPELNVQLPGLPLLKPQDLPSFILPTNPFGALSKVLADMLKDMKKLKWVLANSFYELEKEVIDSMAETYPVIPVGPLLPLSLLGVDENEDVGIEMWKPQDSCLEWLNDQPPSSVIYISFGSLIVLSAKKLESIATALKNSNCKFLWVIKKQDGKDSLPLPQGFKEETKNRGMVVPWCPQTKVLVHPAIACFLTHCGWNSMLEAIAAGKPMIAYPQWTDQPTNAKLVSDVFRVGIRLEQDSDGFVETGELERAIEEIVSGPKSEELKRNAAELKRAAREAVADGGSSDRNIQTFVDEILATRLDVMESSNEVNK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0403 490 Coils Coil 439 459 - -
Lja5g0403 490 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 10 477 - -
Lja5g0403 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 475 - -
Lja5g0403 490 CDD GT1_Gtf-like 11 456 IPR002213 GO:0008194
Lja5g0403 490 Gene3D Glycogen Phosphorylase B; 16 467 - -
Lja5g0403 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 288 438 IPR002213 GO:0008194
Lja5g0403 490 ProSitePatterns UDP-glycosyltransferases signature. 353 396 IPR035595 -
Lja5g0403 490 Gene3D Glycogen Phosphorylase B; 267 455 - -
Lja5g0403 490 PANTHER GLYCOSYLTRANSFERASE-RELATED 10 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0403 Lja-Chr5 3594683 3596471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0403 1 474 Glycosyltransferase AT2G23260 44.283 1.31e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0403 K13692 - gmx:100778995 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0403 5 3594683 3596471 Lja5g0403 5 3594683 3596471 ECH