Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0399 ATGTCGACGGGAAAACCCAAAGACGCTGATTTTCAGATGGTTGCAGTGCCGGGAATGTCGAAGCCACCACTTCCTCCGGCAACTTCATCGAGTGCTATAGTTGAATATACTCCCGTTTTTAAGGAGGAAGAGGAAGACCTGGAAATCAAGCTCCGACGAATTATCGATAACGTCCCCGTCCGTGTCAGCAATACTTCCGGTAGTTCTGCAGGTTCTGGCTCCGGTGACTTCCACCAGTATCGGCAGATGAGACGCAAAGAGCAAGATCGTCTTGCTAGGATGGAAGTTGACTACCAGAGAAGGAAAGAACTTGCGGAATTTAGTATGAGAAGGGAGGAAAGATTAAAAGCTGCGGAGGAACGAACAGCAAAAAAGCGAGCAAAACGTCAAAAGAAAAAGCAAAAGAAAAAGGAGAAGAAGTTGAAACTGAATGCTGGAGAACCACAGCAAGAGAAAGAAGATTCCTCAGATGATGGAGATTCTGATAATGAAGAGGAGGCCGCACCTTGA 510 0.4647 MSTGKPKDADFQMVAVPGMSKPPLPPATSSSAIVEYTPVFKEEEEDLEIKLRRIIDNVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQRRKELAEFSMRREERLKAAEERTAKKRAKRQKKKQKKKEKKLKLNAGEPQQEKEDSSDDGDSDNEEEAAP* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0399 169 Coils Coil 110 144 - -
Lja5g0399 169 MobiDBLite consensus disorder prediction 125 139 - -
Lja5g0399 169 MobiDBLite consensus disorder prediction 79 124 - -
Lja5g0399 169 MobiDBLite consensus disorder prediction 60 76 - -
Lja5g0399 169 Pfam Protein of unknown function (DUF1168) 53 166 IPR009548 GO:0003725
Lja5g0399 169 MobiDBLite consensus disorder prediction 60 169 - -
Lja5g0399 169 MobiDBLite consensus disorder prediction 153 169 - -
Lja5g0399 169 PANTHER UNCHARACTERIZED 24 166 IPR009548 GO:0003725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0399 - - gmx:100777035 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0399 5 3553305 3555718 Lja5g0399 5 3553305 3555718 ECH