Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0398 ATGGGAGAACCAAATCGGATCTCCGTTCACCACGCTCTCGGCGCTGGCTCAGTTGCCGATGTGCTGCTCTGGAAGAACTGGCGTGGAGGAGTTACGGTGCTGGTTTCGGCGACGGCATTGTGGTACCTGTTTGAGCGAGCCGGTTACAATTTCTTGTCATTCGTTGCCAATGTTGTATTGCTTCTCGTCGTGATTCTCTTCCTATGGGCCAAAGCTGCTAACCTTCTCAACAGACCACTTCCTCCTCTTCCTGATCTGGAGATCTCAGAGGAAACTATAGCCAGGGTTGCTGATTCACTACAAATTTGGTTAAATCGGGTTTTGTCTCTCGCACATGACATTGCGATTAAGAGGAATTTGCTGCTTTGCCTTCAGGTTGTTGGTGCATTGTGGGTAATATCTTATATTGGTAGTCTGTTCAACTTCTTGACCTTGATCTATATAGGTGTTCTTCTTAGCTTGTCTCTTCCTGTGTTGTATGACAAGTACCAGGACCAAATTAATGATAAGCTGTATCTGGTGCATGGGATTTATCTGACACAATATAAAACGATTCACAGGGTTGTTTTAAGCAAGATCCCAAAATTCACAAACAAAGAAAAGAAGGTGCAGTAG 615 0.4472 MGEPNRISVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNFLSFVANVVLLLVVILFLWAKAANLLNRPLPPLPDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVGALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRVVLSKIPKFTNKEKKVQ* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0398 204 ProSiteProfiles Reticulon domain profile. 18 204 IPR003388 -
Lja5g0398 204 PANTHER RETICULON 5 204 IPR045064 GO:0009617
Lja5g0398 204 Pfam Reticulon 18 171 IPR003388 -
Lja5g0398 204 PANTHER RETICULON-LIKE PROTEIN B11 5 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0398 Lja-Chr5 3551263 3552914 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0398 K20723 - gmx:100527029 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0398 5 3551263 3552914 Lja5g0398 5 3551263 3552914 ECH