Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0395 ATGGAAACAGCCACACATGCAGATCCAAACGAGCATCCACCCAAAACCAAACGACAGATCTTCATTCTCTCCGGCCAAAGCAACATGGCCGGACGAGGCGGCGTGATTAAGAACCCCCACCACCACCCAAACAAGCGCTGGGACGGCGTCGTTCCACCGGAGTGCCACCCTGACCCTTCCATCCTCCGCCTCAGCGCCGCCCTCCGATGGGAGCCAGCTCACGAGCCTCTCCACACCGACATCGACACTAAGAAAGTCTGCGGCGTGGGTCCCGGCATGTGCTTCGCCAACGCGGTGCGGCGGCGCGTGGGCGGCGAGTTCGGCCTTGTCCCGTGTGCCGTGGGTGGCACCCCCATGAAGGAGTGGGCGCGTGGGGAGGAGTTGTATGAAAACATGGTGAAGAGAGCCAAATTCAGCGTGACCGGCGACCACGGTGGCGAGATCAAAGCATTGCTGTGGTTCCAGGGAGAGAGTGACACTTCCAGTGAGCATGATGCAGAGGCTTACAAGGTCAACATGGAAACGCTCATCCACAATGTTCGTCAAGACCTCAATCTTCCATCTCTTCCCATCATTCAGGTTGCAATAGCCTCAGGGTTTGAGTACATGGAGAAAGTGAGGGAAGCACAAAAAGGGATTGAACTTCCAAATGTGATTTGCGTGGATGCAAAGGGATTTCAGTTGAAGGAAGATAATCTTCATCTTACCTTGGAGGCTCAAGTTAAGTTGGGTCACATGCTGGCTGAGGCCTATCTTACCCATTTTGTTGCATGA 774 0.5504 METATHADPNEHPPKTKRQIFILSGQSNMAGRGGVIKNPHHHPNKRWDGVVPPECHPDPSILRLSAALRWEPAHEPLHTDIDTKKVCGVGPGMCFANAVRRRVGGEFGLVPCAVGGTPMKEWARGEELYENMVKRAKFSVTGDHGGEIKALLWFQGESDTSSEHDAEAYKVNMETLIHNVRQDLNLPSLPIIQVAIASGFEYMEKVREAQKGIELPNVICVDAKGFQLKEDNLHLTLEAQVKLGHMLAEAYLTHFVA* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0395 257 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 14 255 - -
Lja5g0395 257 PANTHER BNACNNG62850D PROTEIN 14 255 - -
Lja5g0395 257 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 18 252 IPR005181 -
Lja5g0395 257 Gene3D SGNH hydrolase 18 256 IPR036514 -
Lja5g0395 257 SUPERFAMILY SGNH hydrolase 19 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0395 Lja-Chr5 3527505 3528953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0395 - - mtr:MTR_1g107475 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0395 5 3527505 3528953 Lja5g0395 5 3527505 3528953 ECH