Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0392 ATGGCACTTGCAACTCAAACCTCTGCATCTCTTTCTATCTCTTTTCGTGATGCTTGTGTTTTCCCTGCTGCAAAATACTCTGCCACTGCTCGCTTTCCTCTACCAAATTTGGTTCCTTCTAGAGCATCCTTCGCCACTGGTACCCCACTATTGATTCGGAGAAGTCATGGAAGGAAACTTGCGTGCAGAGCAATGCCGGTTTCAATAAGAAGTGAGCAAAGTACCAAGGATGGGAACGGTTTGGATGTGTGGCTAGGGCGGCTAGCGATGATTGGCTTTGCAGCAGGCATCACTGTTGAAGTTGCTACTGGAAAGGGACTCCTAGAGAACTTTGGAGTCGCATCTCCACTGCCTACAGTTGCACTGGCAGTAACAGCACTCGTGGGTGTCTTGACAGCAGTCTTCATCTTCCAATCAGCCTCAAAGAACTGA 432 0.4861 MALATQTSASLSISFRDACVFPAAKYSATARFPLPNLVPSRASFATGTPLLIRRSHGRKLACRAMPVSIRSEQSTKDGNGLDVWLGRLAMIGFAAGITVEVATGKGLLENFGVASPLPTVALAVTALVGVLTAVFIFQSASKN* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0392 143 SUPERFAMILY Chlorophyll a-b binding protein 82 127 - -
Lja5g0392 143 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 26 143 - -
Lja5g0392 143 PANTHER STRESS ENHANCED PROTEIN 1, CHLOROPLASTIC 26 143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0392 - K07937 gmx:100306702 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0392 5 3510817 3512984 Lja5g0392 5 3510817 3512984 ECH