Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0391 ATGGGCAAGACAAGTACAAGGTCTGATTCAAAGTCCGACCGCAAGCTTGAAAAGAAGCTAGAGTTTTATTCCAAGGTGAAAGATACTGTTGCTTCCTTGGGCGCCCAAAAGTCTATTAGCAAGAAGAAGAGCAAACAGCAAAGGCGGCAGAATAAATTGAAGGCATATAACCTTTCCTCAATCTTAGAGTCTCTTCCGGAGTTGAAGGCATCACAGAAATCAGATCGTGAGGATGACTTTAAACTAAATTGCAAATCTAGGAAGAAACTATTATTGAAGGAAGGACAACGGTTGTCTGCAGTTCTTAAGGATAATTTATTCCAAGCGGATCCATTGGCTATCCTCCATCAACACTTGCAGAACACACAACCGATAGAAGAGAAACAACCCAAGAAGAAAGTTAACAAAAATGGATCCAAGAAGAGGAAGAAATCAAAGGCTTCAACTGGATTACAGTCTATGGATATGTGA 471 0.4034 MGKTSTRSDSKSDRKLEKKLEFYSKVKDTVASLGAQKSISKKKSKQQRRQNKLKAYNLSSILESLPELKASQKSDREDDFKLNCKSRKKLLLKEGQRLSAVLKDNLFQADPLAILHQHLQNTQPIEEKQPKKKVNKNGSKKRKKSKASTGLQSMDM* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0391 156 Pfam Ribosome biogenesis protein SLX9 8 122 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Lja5g0391 156 MobiDBLite consensus disorder prediction 120 156 - -
Lja5g0391 156 PANTHER PROTEIN FAM207A 7 131 - -
Lja5g0391 156 PANTHER PROTEIN FAM207A 7 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0391 Lja-Chr5 3507953 3510711 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0391 - - mtr:MTR_1g107495 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0391 5 3507953 3510711 Lja5g0391 5 3507953 3510711 ECH