Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4027 ATGGCTGCCACAAGCTGCAACCTCACCCATGCTTCTGGTCTCAAGAAACTCAATGAGCACCACCTCCATATGAAGAGCTACTTCAAAGGGAAAATTCCCTCAACCCTTCTCCCATTTTCATCAACTGGCAAAATGAAAAGTAGTAAATTTAAAGTTGAGGCAGTGAATGGTAATTGGTTCTGTGAAACTGGGTTGAAGAGAAATAGAGGACTGTTGCAAGTTCAGAGGTTAGACCAATACCCATTTGTGGCTTGTGCAAGTGGAGCAGAGTTATCATCTTCTAGCTTTGAAGACCATGAAGAGGAGGATGTTTCAAAGGAAATCTTGATTTGGAGGGCAATCAAGTTGCCAATTTACTCTGTTGCTTTTGTGCCTCTCACTGTAGGCAGTGCAGCAGCTTATTTGCAGGCAGGCATCTTCTCAGCTAGACGCTATTTTGTTCTCTTAGCTTCTTCAGTTCTTGTTATTACCTGGCTCAATTTAAGCAATGATGTTTATGATTTTGACACTGGAGTTGACAAGAACAAGAAGGAATCAGTTGTAAACTTGGTTGGAAGCCGAACAGGAACCTTCATCGCTGCATACTCTTGTCTTGCTCTTGGCTTCGTTGGGCTGGCTTGGGCTGCTGTGGTGGCAGGAAACATGCGTTCAATGTTGTTTCTTTCTTGTGCAATTATTTGTGGGTATATATATCAGTGTCCACCATTTCGGTTAAGCTACCAGGGGCTGGGAGAGCCCTTGTGCTTTGCAGCATTTGGTCCTTTTGCCACTAGTGCTTTTTATTTATTACAGGGTAGTGCAAGTGTGATGAACTATTTCCCCTTAAGTGGAACGGTTCTTTCAGCCTCGATCCTTGTCGGCTTCACAACATCTCTTATCCTGTTTTGCAGTCATTTCCATCAGGTGGAAGGAGACAAGGAAGTTGGAAAAATGTCACCTTTGGTTAGACTTGGCACTAATAGAGGTGCTGAGGTAGTGCAAGTGGTAGTCTTGATGCTCTATGCTCTTTTGTTTACTTTTGGTCTAAGCAAGGCACTTCCTCTCACTTGTATTTTACTTTGTACATTGACCTTGCCAATGGGAAACCTGGTAGTAAGATTTGTCCAAGAAAATCACAAGGACAAAAGCAAGATTTTCATGGCTAAGTACTTCTGTGTGAGGTTGCATGCTTTGTTTGGAACTGCACTGGCTTTTGGTATGGTCTTGGCTAGGGTTGTTAATACAACATTTACATCAAGGCCAATATTAAGTTGA 1254 0.4266 MAATSCNLTHASGLKKLNEHHLHMKSYFKGKIPSTLLPFSSTGKMKSSKFKVEAVNGNWFCETGLKRNRGLLQVQRLDQYPFVACASGAELSSSSFEDHEEEDVSKEILIWRAIKLPIYSVAFVPLTVGSAAAYLQAGIFSARRYFVLLASSVLVITWLNLSNDVYDFDTGVDKNKKESVVNLVGSRTGTFIAAYSCLALGFVGLAWAAVVAGNMRSMLFLSCAIICGYIYQCPPFRLSYQGLGEPLCFAAFGPFATSAFYLLQGSASVMNYFPLSGTVLSASILVGFTTSLILFCSHFHQVEGDKEVGKMSPLVRLGTNRGAEVVQVVVLMLYALLFTFGLSKALPLTCILLCTLTLPMGNLVVRFVQENHKDKSKIFMAKYFCVRLHALFGTALAFGMVLARVVNTTFTSRPILS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4027 417 CDD PT_UbiA_UBIAD1 111 399 IPR026046 GO:0004659
Lja4g4027 417 Hamap 2-carboxy-1,4-naphthoquinone phytyltransferase [menA]. 92 400 IPR011937 GO:0004659|GO:0016021|GO:0042372
Lja4g4027 417 Pfam UbiA prenyltransferase family 124 380 IPR000537 GO:0016021|GO:0016765
Lja4g4027 417 PANTHER UBIA PRENYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 97 405 - -
Lja4g4027 417 TIGRFAM menA_cyano-plnt: 1,4-dihydroxy-2-naphthoate phytyltransferase 111 401 IPR011937 GO:0004659|GO:0016021|GO:0042372
Lja4g4027 417 PANTHER 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE 97 405 IPR026046 GO:0004659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4027 K23094 - gmx:100790629 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4027 4 73301528 73305547 Lja4g4027 4 73301528 73305547 ECH