Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3956 ATGGAAGATCACAATTTTGTTGTTGGTCAAGAATTCCCTGATGTGAAGGCATTACGGAGTGCAGTTAAAGAAGCTGCGATAGCACAGCATTTTGAGCTTCGTATTATTAAAAGTGACCTGATTCGGTACTTTGCTAAGTGTGCCTCTGAGGGGTGTCCATGGCGGATTCGTGCTGTCAAGCTCCCTAATGCCCCGACATTTATCATAAGAAGTCTTGAAGGGACACATACTTGTGAGAGAAATGCACTCAATGGGCACCACCAGGCTTCTGTTGATTGGATCGTGAGCTTTATAGAAGAGAGGTTGAGAGATAACATCAATTATAAACCAAAAGATATTTTACATGACATCCATAAACAATATGGTATAACTATACCGTATAAGCAAGCTTGGCGTGCAAAAGAACGGGGCCTTGCAGCAATATATGGCTCTTCTGAAGAAGGATATTACCTACTTCCTGCATACTGTGAAGAAATTAAGAAAACAAATCCTGGAAGTGTTGCAGAGGTGTTTACAACTGGCGCCGATAACCGATTTCAGAGACTTTTTGTTAGCTTTTATGCATCAATTTATGGTTTTCTTAATGGTTGTTTGCCTATTGTTGGACTTGGTGCGATCCAGCTGAAAAGCAAGTACCTTGGCACATTACTTTCAGCAACTTCGTTTGATGCTGATGGTGGTTTGTTTCCACTTGCTTTTGGTGTTGTGGATGTAGAAAATGATGACAACTGGACCTGGTTCCTGTCTGAGTTGCATAAGGCACTAGAGGCGAGTACTGAAAGCATGCCACAGATTATATTTTTGTCAGATGGGCAAAGGGGTATTACAGACGCTCTGAGAACGAAGTTCTCAAATTCATCTCATACATTCTGCATGCGTCACTTGAGTGAAAGCATTGGCAAAGAGTTCAAGAACTCTAGGCTTGTCCATCTTCTATGGAAGGCTGCATATGCCACCACAACTATTGCATTTAAAGAAAAAATGGCTGAAATAGAAGAGGTCTCTCCTGAAGCTGCTAAATGGTTACAGCAATTTCATCCTTCCCAATGGGCCCCGATATATTTTGAAGGGACGCGATTTGGCCATCTATCCTCTAACATTGAGGAGTTTAATAAATGGATTCTTGAAGCCCGGGAGTTGCCAATTATCCAGGTGATTGAGCGGATTCATAGCAAACTTAAAACCGAGTTTGATGACCGGCGTTTAAACAGCAGTTCATGGTGCTCTGTGCTTGTCCCATCTGCTGAGAAGAGAATAATTGAAGCCATTGACCGCGCATCTACATATCAAGTCCTGAGATCAGATGAAGTGGAATTTGAGGTTCTTTCAGCTGATCGATCAGATATTGTAAATATTGGCAGCCATAGCTGTTCCTGCCGCGATTGGCAGCTTTATGGGATACCATGTTCCCATGCTGTCGCCGCTCTCATCTCAGGCCGTAAGGATTTCTATGCATTTACTGCTAAGTGTTTCACTGTTGCAAGTTATAGGGAAACTTATGCAGAGGGTATATACCCTATCCCAGGAAAAGTTGAATTGAGAAAAACAGATGAATCCACAATGGATGATGATTTCCTGGTAGTGCGGCCACCAAAACTTCGGCGACCTCCGGGACGCCCTGAGAAGAAGCGGATTTGTGTGGAGGATCATAATCGTGACAAACATACAGTGCATTGTAGTCGATGTAATCAAACTGGACATTACAAGACAACTTGCAAAGCAGAGATGATTAATAGTTTAGAGCAGTTTTAG 1752 0.4252 MEDHNFVVGQEFPDVKALRSAVKEAAIAQHFELRIIKSDLIRYFAKCASEGCPWRIRAVKLPNAPTFIIRSLEGTHTCERNALNGHHQASVDWIVSFIEERLRDNINYKPKDILHDIHKQYGITIPYKQAWRAKERGLAAIYGSSEEGYYLLPAYCEEIKKTNPGSVAEVFTTGADNRFQRLFVSFYASIYGFLNGCLPIVGLGAIQLKSKYLGTLLSATSFDADGGLFPLAFGVVDVENDDNWTWFLSELHKALEASTESMPQIIFLSDGQRGITDALRTKFSNSSHTFCMRHLSESIGKEFKNSRLVHLLWKAAYATTTIAFKEKMAEIEEVSPEAAKWLQQFHPSQWAPIYFEGTRFGHLSSNIEEFNKWILEARELPIIQVIERIHSKLKTEFDDRRLNSSSWCSVLVPSAEKRIIEAIDRASTYQVLRSDEVEFEVLSADRSDIVNIGSHSCSCRDWQLYGIPCSHAVAALISGRKDFYAFTAKCFTVASYRETYAEGIYPIPGKVELRKTDESTMDDDFLVVRPPKLRRPPGRPEKKRICVEDHNRDKHTVHCSRCNQTGHYKTTCKAEMINSLEQF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3956 583 PANTHER POLYPROTEIN, PUTATIVE-RELATED 1 574 - -
Lja4g3956 583 SMART 26again6 455 482 IPR006564 GO:0008270
Lja4g3956 583 Pfam MULE transposase domain 209 296 IPR018289 -
Lja4g3956 583 Pfam MuDR family transposase 5 69 IPR004332 -
Lja4g3956 583 Pfam SWIM zinc finger 446 477 IPR007527 GO:0008270
Lja4g3956 583 ProSiteProfiles Zinc finger SWIM-type profile. 439 480 IPR007527 GO:0008270
Lja4g3956 583 PANTHER OS01G0334000 PROTEIN 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3956 Lja-Chr4 72563775 72567039 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3956 - - zju:107427481 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3956 4 72563775 72567039 Lja4g3956 4 72563775 72567039 ECH