Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3952 ATGGCCACAAGCACAAGAGAAGCCAACCAGCAAAACACGAAGAAGAAACTCCCTCTCTTTCCTCTCCTCTCTCTTCTCTGCTTCTCCTCCATCTTCCTCCTCCTCTCCCAATTCACAACCACCACAACCCCTTCATCTTCCCACCCTCTTCGCACCTTCCAGATCAACCACGGTTCCTGCGACTTTTCCCACGGAACATGGATCCACGACGCCTCAAGGATACCCAGATACGACAACACCTGCAAGGAGATCTTCAAGGGCTGGAACTGCATCTCCGGCAACAAATCCAACGCCGGAGAACTCGCTAAGTGGCGGTGGAAGCCCAATGGCTGCGATCTCCCTCAGTTCGACCCAGTTGGGTTCCTTCAATCTCACACTCATATCAGCATTGGGTTTGTTGGAGACTCGTTGAATAGGAACATGTTCGTGTCTCTTTTCTGCACTCTGAAGAGTGTCTCTGATGTTCAAGTCAAGAAATGGCGACCTGCTGGTGCTGACCGTGGATTCACCTTTCTCCCTTACAATCTCACCATTGCTTATCACCGTACCAATCTTCTGGCTCGTTATGGTAGATGGTCAGCTAGTGACCATGCTGGTGCCTTAGAAGCTCTTGGATTCAAAGAGGGCTATAGAGTTGATGTTGATGTTCTAGAGGGCACATGGGCACAAGCTCCAAGTTTCCACGACATTCTAATTTTGAACACCGGGCATTGGTGGTGGGCCCCTTCGAAATTTGACCCTGTGAAGACACCTATGCTTTTCTTCAAGAAGGGTCAGCCAGTAATTCCTCCACTACTTCCAGATCAAGGCCTGGATATGGTTTTGGAGCACATGATCCCATATGTGGAGGAAAGAGCAAGACCAGGGGCAGTCAAGTTTTTCCGCACTCAATCACCAAGACATTTTGAAGGAGGAGACTGGGATCAAGGTGGTTCCTGTCGAAGGGATCGACCTTTATCCACAGAGCAGGTAGAAGAACTTTTCTCTGTGAAGAACAATGGGACCAATGTGGAGGTTCGACTCGTCAATGAACATCTACATAAGGCTCTTAAGGGATCAGGTTTCATTATTTTGGACATCACTAGATTGAGTGAGTTCAGGGCTGATGCCCACCCAGGTATTGCAGGAGGAAAAAAACATGATGATTGTATGCACTGGTGCTTACCAGGAATTACAGACACCTGGAATGACTTGTTTATACAGCAACTGAATACTATCAAGCGTAGAAGTTGA 1233 0.4809 MATSTREANQQNTKKKLPLFPLLSLLCFSSIFLLLSQFTTTTTPSSSHPLRTFQINHGSCDFSHGTWIHDASRIPRYDNTCKEIFKGWNCISGNKSNAGELAKWRWKPNGCDLPQFDPVGFLQSHTHISIGFVGDSLNRNMFVSLFCTLKSVSDVQVKKWRPAGADRGFTFLPYNLTIAYHRTNLLARYGRWSASDHAGALEALGFKEGYRVDVDVLEGTWAQAPSFHDILILNTGHWWWAPSKFDPVKTPMLFFKKGQPVIPPLLPDQGLDMVLEHMIPYVEERARPGAVKFFRTQSPRHFEGGDWDQGGSCRRDRPLSTEQVEELFSVKNNGTNVEVRLVNEHLHKALKGSGFIILDITRLSEFRADAHPGIAGGKKHDDCMHWCLPGITDTWNDLFIQQLNTIKRRS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3952 410 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 113 401 IPR026057 GO:0016740
Lja4g3952 410 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 8 408 IPR029962 GO:0016413
Lja4g3952 410 Pfam PMR5 N terminal Domain 59 112 IPR025846 -
Lja4g3952 410 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 13 8 408 IPR029968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3952 Lja-Chr4 72519039 72522668 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3952 - - gmx:100802467 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3952 4 72519039 72522668 Lja4g3952 4 72519039 72522668 ECH