Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3562 ATGTTATCGATGGGATTCAATGGAATGCACAACAACAATGCTCGTGGAAGAGACCCGGATTTCGGTGCGATATTTATGTCGAATAGCGGAACAAAGAGGGAATGTTTCAAGAGGAAACTATTTGGCCTTCCATCGTCTGAAATCAAGTTTTTAGAGAAGGTTAAAGCCGGGATGATTTTGTTTTTATTTGAATATGACAAGAGACGACTTCATGGTGTCTTCAAGGCTACTTGTGATGGATCTGTCAATATTGTGCCTAATGCCTTCGCTGCTTCAGGGAAGCAATTCCCTGCTCAGGTTAAGTTCGTTCCAATTTGGTTCTGTGAGCCACTTCATGAAAAGACATTCCGGCGTGCAATCAAAGAAAATTACTTTTCAACTTACAAGTTTAACTTCGGGTTATCTGAAAAGCAGGTCTCTGAACTTCTATACTTGTTCAGCAAGAGAAAGCTAGAAGTGGAGGCTCCTGGGAGATCCTTAACCAGAACAGAAGACTTGAAATCAGACCGGGACAAAGTAGGTAAAGTTCGAAGATCTGTTCGTCGTGAAATGCATGTTGAAACTGTTCGAAATGAGCAAAGAAGTATGAGTGATATCATTTCACCAATCTCAATGCATAAATACCATGGAGATTCTTTGCATCACAATCGAGAAGATGAATATATTGGATTGAATAGAAGTGATATTGTTGTAAACAAGCAAGGAAGAGCTGCTGAGCTCATGGTGGATGCTACAAATGGTTATGCTAGTGAATATTTGACATTCGAAGATGAAAGCAGATTTTCTGCACATGAGAGTGAGGATTATATTAGTATCCGTACATCTGAGTTTGCCGTGGATACTAATGGATATGTTAGTGATTATTTGACATTAAAGGATGAAAGCAGGTTTACTGTGCATGAGAACAAAGATTATATGGACATCCATTCCAGGCCAAACATCATGGGCGGATATTCCAAAAGTCTATCTGATCAAATTATTGCTCCTGGTGATCTCAGGTTATCAATTAGGGATAGGGTTATGGGTCAAGACATAAGAGAGACTGATCAGAGGATGGTACCTTCAGATGATATTCGTGGTTTACATAATTACGATGTGAATCCATCTCTCTTTTACGGAGAGCCTAGGCCAACTTCTGCAACACAAAGAGATATGAGCTGTAGGAGCAATCTTCTGTATAATGCAGATGCTCCTGATTTAAATTTCAATCAGTCATCATCTGTTGGATTTTATAGTGGTTCTAAGTCGATAATAGACACCACTTCTCCTTTAAGAAACAGTGAAAGGAATTCATTAAATAGCCAACCACATCTCATGCTTCCAGAACTGAAAGACATGAACAGATGGCATGATAGTGGTGGTGACTTTCTTAATTCTGTTTTATACAGTAGCAGCAGAGATTGCATGTTTTTCAATGAGGCTCGAAATTCTGACCTGTTGGCACCAGAGTCTCGTTTACACGAAGCTTGCAATAACATTCCTTCCTTGATGCCTCCATCAGCTCCTATCCCTCCATCAGCTCCTATCCCTCCTTCAGATATTGGGAATTCTGGCAGGGTACATGGGCCCTTTTCTTCCATGTTCTATGATAGCAAATCATCTTCAGGCAATAATATTAATCCTGTAGCATTACAAGAAAATATGAGTCATGAGATAGCACTACCAAAGAACAATGTGATGTTTAGTCCTGATGTTCCTTGGGCAAGTGAGAGTCCTTCCCAAGTCCAATATGGTGATTCATTAAATCATGAATATGATATTGGATCTTATCGTGATTCTCAAACTGTTAAGTCTGGTCATCCCAAGAAAAAAAGTAGTGTGTTTTCTCGTTTATCTTTTGTGCAGGATGTTGACAAACAAGAAAATGCAAACAATGCACGGAATAAGAAACATGATTTCCATACTTCAGTTGATGAAGTGATGGAAATGGTACGTCACAGTCAGAACCAGTGGACGACAAAAAGAATGTCAAAGCCAAGCAAGCACAGCAAGGCTGAAAGTTTGAGGAGTAGAACTCAATTAACTGGTTCAAGGAAGAAGGATGATTGCTTTGAAAATACCTTGAAGGATCTAAGTACGGATTTGACTACTGCAAGTGGAGACAAGTCGATGACAAAAAGAATGTCAAAGCCAAGCAAGCACAACAAGGCTGAAAGTTTGAGCAGTAGAACTCAATTAATTGGTTCAAGGATGAAGGATGATTGCTTTGAAAATACCTTGGAGGATCTAAGTATGGATTGGACTACTGCAAGTGGAGAAAATTCCAATAAAATAGCTGAAGATGTATCTTTTGTGGATTTCAAGCGTCGCAGCAAAGTGAGGAAACTTAGTGATGAGACTGAGATTAGAAGTTCCGATGAGAGTGAAAAGACTGAGAATTTGGTACTTGTGCAACCGAAGAGAAGAAAGTTGGTCCGCCCAAATTTCAACAAAAGTACAACTTCTGATGACAAGGGTGTCGATCTTGGTGCTTCTCAAAATTTACCTTTGTCACATGGGAGTTGCAATCTTATGGATGCTAGCAAAAGTGGCTGTTCTTTGCCACAAACAGAGGCAAAAATTAAAACTAGCATTTTAGCACTTTTAGCTCGTGCTGAACTGCAAAACATTATTGGTAATGCACACTCTGAAGATAAGAATACTACTCAGGCCAGGGGACGTGTCTGCAGCGAAGGAGGAGAAAAAGCAACAGACCGTGCTCTTACTGCATTTCATGATGGATCAGAATGCATAGAGAATGTAAAAAATACGAATGTTTTTTCTTCAGCTTCTTGCAGAGACAAGAGTTGCCATATGAAGGAAGGTTTCTGTGCGATGGATAGCATAAAATCAGTTCCACAGGACACGGAATCATTTCATTCTATTTGTCAAGAACATAATGGAGAGGCATCTGCTGGAAGAGGTATGAAGGAAGGTTTCTGTGCGATGGATAGCATAAAATCAGTTCCACAGGACACGGAATCATTTTGTTCTATTTGTCAAGAACATAATGCAGAGGCATATGTTGGCAGGGGTATGAATGCTGAAGAAGAAGCACTGAAAGATGGATCTTCATATTTGCAGAACTCTGGTAATGAAAAAGCTCCAATTGAAACTCCTCATATCAATGAGGGCTTAGGTGTGATGGATAGTACGAAATCAGTATTTCCAGGCATAGAATCACTGCATTCCGTTTGTCAAGGGCACCATTTGGATAAGATCATATGTGCTAGCAGAGGTATTAAAACTCATAATCAAAAAGCTTCAATTACAACTTGCTGTCATATCAAGGAAGGCTTAGGTAGTAATGGTAGTGTAAAATCAGTGTCTGCAAATTCGGAATCACCGCGTTCAATTTGTCAAGAACGTCATGCAGATAAGAATCATGAGATCCTACATGCTGGCGTAGGTGTTAACTCTGAAAAACGAATGCCAAAAGATGGAAGCTCCTCCTTAGCCACTGAATTTAAAGATGGATCAGACACTTCACAGTTCTCTGGCAATGACAATGCTCCAATTGAATCAGTGTCTGCAAACTCGGAATCACTGCGTTCAATTTGTCAAGAACGTCATGCAGATAAGAATCATGAGATCCTACATGCTGGCGTAGGTGTTAGCTCTGAAAAACGAATGCCAAAAGATGGAAGCTCCTCCTTAGCCACTGAATTTAAAGATGGATCAGACACTTCACAGTTCTCTGGCAATGACAATGCTCCAATTGAACAAAAGATGGATTGA 3717 0.399 MLSMGFNGMHNNNARGRDPDFGAIFMSNSGTKRECFKRKLFGLPSSEIKFLEKVKAGMILFLFEYDKRRLHGVFKATCDGSVNIVPNAFAASGKQFPAQVKFVPIWFCEPLHEKTFRRAIKENYFSTYKFNFGLSEKQVSELLYLFSKRKLEVEAPGRSLTRTEDLKSDRDKVGKVRRSVRREMHVETVRNEQRSMSDIISPISMHKYHGDSLHHNREDEYIGLNRSDIVVNKQGRAAELMVDATNGYASEYLTFEDESRFSAHESEDYISIRTSEFAVDTNGYVSDYLTLKDESRFTVHENKDYMDIHSRPNIMGGYSKSLSDQIIAPGDLRLSIRDRVMGQDIRETDQRMVPSDDIRGLHNYDVNPSLFYGEPRPTSATQRDMSCRSNLLYNADAPDLNFNQSSSVGFYSGSKSIIDTTSPLRNSERNSLNSQPHLMLPELKDMNRWHDSGGDFLNSVLYSSSRDCMFFNEARNSDLLAPESRLHEACNNIPSLMPPSAPIPPSAPIPPSDIGNSGRVHGPFSSMFYDSKSSSGNNINPVALQENMSHEIALPKNNVMFSPDVPWASESPSQVQYGDSLNHEYDIGSYRDSQTVKSGHPKKKSSVFSRLSFVQDVDKQENANNARNKKHDFHTSVDEVMEMVRHSQNQWTTKRMSKPSKHSKAESLRSRTQLTGSRKKDDCFENTLKDLSTDLTTASGDKSMTKRMSKPSKHNKAESLSSRTQLIGSRMKDDCFENTLEDLSMDWTTASGENSNKIAEDVSFVDFKRRSKVRKLSDETEIRSSDESEKTENLVLVQPKRRKLVRPNFNKSTTSDDKGVDLGASQNLPLSHGSCNLMDASKSGCSLPQTEAKIKTSILALLARAELQNIIGNAHSEDKNTTQARGRVCSEGGEKATDRALTAFHDGSECIENVKNTNVFSSASCRDKSCHMKEGFCAMDSIKSVPQDTESFHSICQEHNGEASAGRGMKEGFCAMDSIKSVPQDTESFCSICQEHNAEAYVGRGMNAEEEALKDGSSYLQNSGNEKAPIETPHINEGLGVMDSTKSVFPGIESLHSVCQGHHLDKIICASRGIKTHNQKASITTCCHIKEGLGSNGSVKSVSANSESPRSICQERHADKNHEILHAGVGVNSEKRMPKDGSSSLATEFKDGSDTSQFSGNDNAPIESVSANSESLRSICQERHADKNHEILHAGVGVSSEKRMPKDGSSSLATEFKDGSDTSQFSGNDNAPIEQKMD* 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3562 1238 MobiDBLite consensus disorder prediction 1146 1178 - -
Lja4g3562 1238 MobiDBLite consensus disorder prediction 694 724 - -
Lja4g3562 1238 MobiDBLite consensus disorder prediction 1213 1231 - -
Lja4g3562 1238 Pfam Development and cell death domain 22 146 IPR013989 -
Lja4g3562 1238 MobiDBLite consensus disorder prediction 1098 1238 - -
Lja4g3562 1238 SMART dcd 18 148 IPR013989 -
Lja4g3562 1238 ProSiteProfiles DCD domain profile. 18 148 IPR013989 -
Lja4g3562 1238 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 4 963 - -
Lja4g3562 1238 MobiDBLite consensus disorder prediction 646 679 - -
Lja4g3562 1238 MobiDBLite consensus disorder prediction 659 679 - -
Lja4g3562 1238 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 4 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3562 Lja-Chr4 66724698 66729914 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3562 - - lja:Lj4g3v0654500.1 2389.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3562 4 66724698 66729914 Lja4g3562 4 66724698 66729914 ECH