Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3312 ATGGCGCAGTGGTGTCGCTCCTCTGCCGGCCACCTTCGCACGGCGGCGGCGAGCCGGTTATCCTCACCAGCATTCCAGCGCGGTCACTCTTACCATACGATCCAAGCCATCCCGAGAGAGCACTCTGGTAGCGGCGTCGCAGCCAGGGACAGAATGCAAGGTCGAATTCCGGCCGTCGTGTTCTTACAGGACCTTCTCAGCAAAGACGCCGGCAACCGATCGGCGGCGAAGAAGCACTTGCTCACCGTCGAGAAGAAGCAGATTAAGGCCATATTGAACTCCGTTCAAACTTCTTTCTTCTGCTCCACCCGTTTTCCGCTCCAGATTCGTGCTGGATCCGGATCCTCTCATTTGGTTGAATCTGGAACTGTGCTACCTGTTAAGATTCATATGGACCAAGAGAGTGGGCAGATTTTGAATTTGGTGTTTGTTTGGGCTGAAGAGGGGATGAACTTGAAGGTGGATGTGCCTGTTGTTTTCAAAGGAGAAGATGTTTGTCCAGGTCTTCAGAAAGGGGGATTTTTGAATAAGATCAGAACTAGTCTAAAATTTCTTTGTCCATCTGAGCACATTCCTTCAAAAATTGAGGTGGATGTGAGCAACCTAGATATTGAAGATAGGATATTCATGCGTGATATTGAGGTTCATCCATCCTTGAAGCTTCTGAGCAAGAATGAAAACATGCCCATCTGTAAAGTGGTTCCAACAAGTTTGGGAAATCAAGCACCTGTTGATGAGTGA 741 0.4885 MAQWCRSSAGHLRTAAASRLSSPAFQRGHSYHTIQAIPREHSGSGVAARDRMQGRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGSGSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCPGLQKGGFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICKVVPTSLGNQAPVDE* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3312 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 244 - -
Lja4g3312 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 244 - -
Lja4g3312 246 Gene3D Ribosomal protein L25, beta domain 150 228 IPR037121 -
Lja4g3312 246 Pfam Ribosomal protein TL5, C-terminal domain 152 236 IPR020057 -
Lja4g3312 246 Pfam Ribosomal L25p family 34 141 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lja4g3312 246 CDD Ribosomal_L25_TL5_CTC 33 96 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lja4g3312 246 SUPERFAMILY Ribosomal protein L25-like 31 238 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3312 Lja-Chr4 62580502 62584202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3312 K02897 - gmx:100802599 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3312 4 62580502 62584202 Lja4g3312 4 62580502 62584202 ECH