Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3297 ATGGATACAGAAAATTGTAGGGATCGGAAGCATTATGTGCTCGTGCATGGTGCTTGCCATGGTGCTTGGGGTTGGTACAAGGTTAAGCCACTCCTTGAATCTGCTGGGCACATGGTCACAGTGATTGATCTTGCAGCTTCTGGAATCAATATGGAGAAAATTGAAGAGGTTGATACTATTTCACAATACTCTGAGCCTTTGATGCATCTCATGGCCTCAATTCCCCCAAATGAAAATGTAATTCTCGTGGGTCACAGCCTTGGAGGTCTCAACATAGCACTTGCCATGGACAAATTTCCAGAAAAGGTAGCAGTTGGTGTTTTCTTGACAGCTTTTGTGCCGGACACTCAGCACAAACCTTCTTATGTCATGGAAAAGTCTGATAAAACCATGTCGTGGGGAATCAAATATGTCTCTGTCTTGCCCAACTTCTTCATCATGAACCTGGGCATCAGGTTGATCGCAGCACCACCGTCGACAAGTATCTTATTGACTCCTTTTGCCTTCCTAAATGGTTATATTTCAGAGGAAGTCTATGTTCATCAACCCCCAGGTTTTGAAGATGAGAAGAAGCCAGACCATGATCTTGAACTTGCCAAGACTTTATTGAGGCCATCGTCCCTCTTTATGGAAGACTTGTCAGAGCAGAAGAGCTTCTCGAAATATGGTTTTGGATCAGTTCCACGCGCTTTTATAACTTGCACCGAGGACCTTGGAATCCCACTGAAATTTCAGCTCTGGATGATTCAAAATGCTGGGATCAAAGACGTCCAAGAGATCATAGGCGCAGATCATATGGCCATGCTTTGCAAGCCAAGAGAAGTATGCGATTTTCTCTTGGAGATAGCTATTAAATACGCATAA 864 0.4387 MDTENCRDRKHYVLVHGACHGAWGWYKVKPLLESAGHMVTVIDLAASGINMEKIEEVDTISQYSEPLMHLMASIPPNENVILVGHSLGGLNIALAMDKFPEKVAVGVFLTAFVPDTQHKPSYVMEKSDKTMSWGIKYVSVLPNFFIMNLGIRLIAAPPSTSILLTPFAFLNGYISEEVYVHQPPGFEDEKKPDHDLELAKTLLRPSSLFMEDLSEQKSFSKYGFGSVPRAFITCTEDLGIPLKFQLWMIQNAGIKDVQEIIGADHMAMLCKPREVCDFLLEIAIKYA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3297 287 PANTHER METHYLESTERASE 1-RELATED 8 286 - -
Lja4g3297 287 Gene3D alpha/beta hydrolase 6 287 IPR029058 -
Lja4g3297 287 Pfam Alpha/beta hydrolase family 13 277 IPR000073 -
Lja4g3297 287 SUPERFAMILY alpha/beta-Hydrolases 8 282 IPR029058 -
Lja4g3297 287 PANTHER METHYLESTERASE FAMILY MEMBER 8 286 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3297 Lja-Chr4 62133730 62175241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3297 9 126 Miscellaneous Gene Families AT5G10300 61.017 7.68e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3297 - - gmx:100796281 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0375 2 3450784 3452015 Lja4g3297 4 62133730 62175241 PCT