LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g3232	ATGAGATACAGAGTTTCGTATTTGATGGATGAGATCTGGGAGAGGGCCGTTGAAACGGCGTTAGAAGGCGAGAAGGATGATGCTTCGACGCGGACGCTAACCCTAGACGGCGCCGTTAAGTGTGTTCAGGGGCGGTTACCACCACCGAGCCTTCTAGAGAGGTTCGAGAATCTTCAGCATCTGTCGATAGCAAACGTCGGCGTTTCGTCGTTGGAGCAGTTCCCGAGGCTGAGGAGTTTGCAGAAGCTGAACCTCTCTGACAACCGCATCGCCGGCGGGTTGGAGTTTCTGGTGCAGGCGGGGCTGGACTCGCTGCGGGATCTTGATTTGTCGAATAATCGGATTCAGTTTATTGAGGATCTTGCGCCGTTGGCGGAGGTGAGGTTGGTGTCGCTGGATCTGTATGAGTGTCCGGTGACTAGGGTGAAGGATTATCGATCTAGGGTTTTCGGGTTGATTAAGTCGCTGAGGTTTCTGGATAAGATGGATGCGGATGGGAATGAGAGGCCGGAGTCGGATGATGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGGGGAGGAGGAGGATGATCCGGGGAGTGGGGAGATTGATGGCGAGGAGGATCGTGGGTTTGGGGTGAAGAATGGGCATGTTGAAGGGGCTGATGGTGTTGTGGATGCTGATGATGATGAGGAGAGCGATGCCGATGAGGAGGAGGTGGAGACCTCGAGGGGTAGGGTGAACGGCGGGTCGAACCATGTGGAGAACGGGTTCCGTGTTGCCCCTGCTGGGGGCGATGATGTGGAGGAGGAGGATGATGAGGATGATTCCGGGGAGGAGATTGATGAGGAGGGTGGCGACGATGAGGACGATGATGATGATGATGTTGTTGAAGTTCATGAGATTGTGGATAGTGACGACGATGATGAGGACGGTGTTGAGTTTGATGAGGATGACGATGACGAGGATGATGAGGAGGAAGAGGTGGATAATGATGAAGGGGATTTCGCTGAGCCGGAGAGTACTGGGAGGTTGACTAGCACTGAGGGCGAGATTGATGGTCATGAGCAGGGGGAGGAAGATGGGGACGATGATGACATCGGGGAGACTGGAGAAGATGAGATGGGGATAGAGGAAGATGATGGAGAGTTTGAAGATGATGATGAAGAGGATGACTATGGTGGCGGATATCTTGTTCAGCCGGTTGCGCAGTCTGAGGCTCTGAATACTGCTGATGTTGCTGACGTGGATGATGTAAATGAGAATGGTGAAGAGGAGGAGGAAGAGGAAGTTGACGACGACGATGATGATGTCCAGGTGCTGCCTGCTGCTGCTACCTCTTCACACCCGAAAAGGAAGAGGGATGATGATGCTGATGACAGTGAAGAAGAAGATGAAGATGATGAAGACGTGGTAGCATTCTCAAAGCCGTCAAAGAAGCATCATTGA	1428	0.5301	MRYRVSYLMDEIWERAVETALEGEKDDASTRTLTLDGAVKCVQGRLPPPSLLERFENLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLAPLAEVRLVSLDLYECPVTRVKDYRSRVFGLIKSLRFLDKMDADGNERPESDDEEEEEEEEEEGEEEDDPGSGEIDGEEDRGFGVKNGHVEGADGVVDADDDEESDADEEEVETSRGRVNGGSNHVENGFRVAPAGGDDVEEEDDEDDSGEEIDEEGGDDEDDDDDDVVEVHEIVDSDDDDEDGVEFDEDDDDEDDEEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDDDDIGETGEDEMGIEEDDGEFEDDDEEDDYGGGYLVQPVAQSEALNTADVADVDDVNENGEEEEEEEVDDDDDDVQVLPAAATSSHPKRKRDDDADDSEEEDEDDEDVVAFSKPSKKHH*	476

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja4g3232	475	Pfam	Leucine-rich repeat	64	172	-	-
	Lja4g3232	475	PANTHER	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32-RELATED PROTEIN 2	9	326	-	-
	Lja4g3232	475	Gene3D	Ribonuclease Inhibitor	12	178	IPR032675	-
	Lja4g3232	475	MobiDBLite	consensus disorder prediction	163	475	-	-
	Lja4g3232	475	MobiDBLite	consensus disorder prediction	259	329	-	-
	Lja4g3232	475	ProSiteProfiles	Leucine-rich repeat profile.	104	125	IPR001611	GO:0005515
	Lja4g3232	475	MobiDBLite	consensus disorder prediction	410	432	-	-
	Lja4g3232	475	MobiDBLite	consensus disorder prediction	169	196	-	-
	Lja4g3232	475	MobiDBLite	consensus disorder prediction	347	387	-	-
	Lja4g3232	475	MobiDBLite	consensus disorder prediction	217	231	-	-
	Lja4g3232	475	PANTHER	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32	9	326	IPR045081	-
	Lja4g3232	475	SUPERFAMILY	L domain-like	48	165	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja4g3232	-		-	lja:Lj4g3v0938830.1	417.927

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g3232	4	60969923	60973780	Lja4g3232	4	60969923	60973780	ECH