Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3218 ATGAGTTTGGAAATGGCTGCAGAGTCATCAGAGGGTGAAGAAGAAGCAGGGAAGCTCACCGGAGGGAACCACTTGCTTGTTGTTGACGATGAGCTCACTGAATTGGGCAAGAAGGCCGCTTGGAGTGTCAGTTCCTGCAAGCCCGGCAACAGTGTTTCTTCTCTTCGCGATCAAAACCTCGAAACTTTCTGGCAATCCGATGGAGCTCAACCCCATTTGGTTAACATTCAATTTCAAAAGAAAGTTCGACTACAATTAGTGGTGCTGTATGTGGATTTCAAGCTTGATGAGAGCTACACGCCTAGCAAAATTTCCATTCGTGCCGGTGATGGCTTTCACAATTTGAAGGAGATAAAATCTGTGGAACTTGTGAAGCCATCTGGTTGGATTTACCTCTCATTATCTGGAGTTGATCCTCGGGAAACTTTTGTGAACACTTTTATGTTACAAATTGCTGTGTTGTCGAACCATCTGAATGGAAGGGATACTCACGTGCGGCAGATCAAAGTTTACGGGCCTCGACCGAACCCCATTCCGCATCAGCCATATCAATTTACTTCAAGAGAGTTCATAACCTACTCTACCATAAGATGA 594 0.4512 MSLEMAAESSEGEEEAGKLTGGNHLLVVDDELTELGKKAAWSVSSCKPGNSVSSLRDQNLETFWQSDGAQPHLVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKSVELVKPSGWIYLSLSGVDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPHQPYQFTSREFITYSTIR* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3218 197 SMART APC10_2 32 196 IPR004939 -
Lja4g3218 197 CDD APC10 34 172 IPR016901 GO:0005680|GO:0031145
Lja4g3218 197 ProSiteProfiles DOC domain profile. 11 197 IPR004939 -
Lja4g3218 197 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g3218 197 Pfam Anaphase-promoting complex, subunit 10 (APC10) 24 194 IPR004939 -
Lja4g3218 197 PIRSF APC10 7 197 IPR016901 GO:0005680|GO:0031145
Lja4g3218 197 Gene3D - 2 174 - -
Lja4g3218 197 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 15 197 - -
Lja4g3218 197 SUPERFAMILY Galactose-binding domain-like 23 173 IPR008979 -
Lja4g3218 197 PANTHER ANAPHASE-PROMOTING COMPLEX 10 15 197 IPR016901 GO:0005680|GO:0031145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3218 K03357 - gmx:100526925 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3218 4 60746957 60751529 Lja4g3218 4 60746957 60751529 ECH