Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3214 ATGGCTTCTTCTACTTGTGCTCTCTCACCTTCTGCCAGATTACAACTCACCAAAACCACCCTCGCTGCTCCACTCTCTTTCTATCACCGAAGCAAGTGTCAAATGAGCAGAAGGGGTTTTGCTGTGAAGGGGATCGTGGCTTCTGGAGTTTCAGTCATGGCTTCTACTCTAACTGCAGAACCTGAGCCAGCTCAAGGTTCGGAAAGACTACCATTCAAACCAGAAGGGTACAATTATTGGACTTGGAGGGGTCATAAAATACACTATGTTGTGCAAGGAGAAGGATCTCCTATTGTCCTTATTCATGGCTTTGGAGCATCTTTGTTCCACTGGAGGTACAACATTCCAGAATTGGCTAAGAAACACAAGGTTTATGCCATAGACTTGCTTGGATTTGGGTGGAGTGAGAAAGCACTTGTTGATTATGATGCCATGGTGTGGAAGGATCAAGTTGTGGACTTCATGAAGGAAATAGTAAAAGAACCAGCGGTTTTAGTTGGAAACAGCCTTGGAGGATTTACTGCTTTGATCTCAGCAACTGGGTTGCCTGAGCTTGTCAACGGAGTTGTTTTACTGAATTCTGCAGGACAATTTGGTGATGGGAACAAGGAAAGTAAAACTTCTGAAGAAACATCTCTACAAAAGTTTATCCTAAAACCTCTAAAGGAAGTTTTCCAGCGTGTAGTTCTTGGATTTTTGTTCTGGCAGGCAAAGCAACCAGCTCGGATTGAATCAGTCTTAAAGAGTGTGTATGTAAATTCTTCTAACGTGGATGATTATCTTGTGGAATCTATAATGAAGCCAGCTGAAGACCCCAATGCTGGAGAAGTTTATTACAGGTTAATGACGCGATTCATGACGAATCAGAGCAAGTACACTCTAGATACTGTTTTAAGCCAACTCTCTTGCCCCTTGCTTTTAGTCTGGGGTGACCTTGACCCATGGGTTGGTCCAGCCAAAGCAAATAGAATCAAAGAGTTCTATCCAAAAACAACCGTTGTGAACTTGCAGGCAGGGCATTGTCCACATGATGAGGTACCAGAGCTTGTGAACAAGGCCTTATTGGATTGGTTGAGCACACTCACTCCTGAAGTGTCTCTCCAAACAGTTTGA 1113 0.4358 MASSTCALSPSARLQLTKTTLAAPLSFYHRSKCQMSRRGFAVKGIVASGVSVMASTLTAEPEPAQGSERLPFKPEGYNYWTWRGHKIHYVVQGEGSPIVLIHGFGASLFHWRYNIPELAKKHKVYAIDLLGFGWSEKALVDYDAMVWKDQVVDFMKEIVKEPAVLVGNSLGGFTALISATGLPELVNGVVLLNSAGQFGDGNKESKTSEETSLQKFILKPLKEVFQRVVLGFLFWQAKQPARIESVLKSVYVNSSNVDDYLVESIMKPAEDPNAGEVYYRLMTRFMTNQSKYTLDTVLSQLSCPLLLVWGDLDPWVGPAKANRIKEFYPKTTVVNLQAGHCPHDEVPELVNKALLDWLSTLTPEVSLQTV* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3214 370 SUPERFAMILY alpha/beta-Hydrolases 78 358 IPR029058 -
Lja4g3214 370 Pfam Alpha/beta hydrolase family 98 352 IPR000073 -
Lja4g3214 370 PRINTS Alpha/beta hydrolase fold signature 179 192 IPR000073 -
Lja4g3214 370 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Lja4g3214 370 PRINTS Alpha/beta hydrolase fold signature 121 136 IPR000073 -
Lja4g3214 370 Gene3D alpha/beta hydrolase 76 361 IPR029058 -
Lja4g3214 370 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 361 - -
Lja4g3214 370 PANTHER PHEOPHYTINASE, CHLOROPLASTIC-LIKE ISOFORM X1 6 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3214 Lja-Chr4 60725954 60729435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3214 97 348 Acyl Lipid Metabolism Gene Families AT3G10840 25.163 7.51e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3214 - - gmx:100776976 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3214 4 60725954 60729435 Lja4g3214 4 60725954 60729435 ECH