Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3213 ATGGCTAGCAATGAAGAACAAAGTTTCAAGACTTTGGGATTGCCTAATGTTGTGCTGAATGAAAGAATTCTTTCTTCTCTCACTCGGAGAGATTTCGCTGCTCATCCTTGGCATGACTTAGAGATTGGGCCAGGAGCTCCATCAATTTTTAATTGTGTGGTTGAAATTGGTAAAGGCAGCAAGGTTAAGTATGAGTTGGACAAGGCAAGTGGACTTATAAAGGTTGATCGCATCCTTTACTCATCTGTTGTCTACCCACACAACTATGGTTTTATCCCAAGAACCATTTGTGAAGACAATGATCCCATGGATGTCCTGGTTCTGATGCAGGAGCCTGTGATCCCTGGTTGTTTCCTTCGTGCTCGTGCTATTGGATTGATGCCCATGATTGACCAGGGAGAGAAGGATGACAAGATCATAGCAGTTTGTGCTGATGACCCTGAGTTCCGTCATTACAAGGACATCAAGGAGCTTCCTCCACATCGGCTTGCTGAAATTAGAAGATTCTTTGAGGACTACAAGAAGAATGAGAACAAAAAAGTTGATGTGGAAGACTTTCTACCAGCTGAAGCTGCTGTTCAGGCTATCAAATACTCCATGGACCTTTATGCTGCCAGTGTAGTCCAGAGCTTGAGGCAGTGA 642 0.4393 MASNEEQSFKTLGLPNVVLNERILSSLTRRDFAAHPWHDLEIGPGAPSIFNCVVEIGKGSKVKYELDKASGLIKVDRILYSSVVYPHNYGFIPRTICEDNDPMDVLVLMQEPVIPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDYKKNENKKVDVEDFLPAEAAVQAIKYSMDLYAASVVQSLRQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3213 213 PANTHER BNAC07G03580D PROTEIN 15 205 - -
Lja4g3213 213 PANTHER INORGANIC PYROPHOSPHATASE 15 205 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja4g3213 213 Gene3D Inorganic pyrophosphatase 31 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja4g3213 213 SUPERFAMILY Inorganic pyrophosphatase 28 205 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja4g3213 213 CDD pyrophosphatase 49 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja4g3213 213 ProSitePatterns Inorganic pyrophosphatase signature. 99 105 - -
Lja4g3213 213 Hamap Inorganic pyrophosphatase [ppa]. 48 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lja4g3213 213 Pfam Inorganic pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3213 Lja-Chr4 60720034 60723507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3213 K01507 - zju:107424657 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3213 4 60720034 60723507 Lja4g3213 4 60720034 60723507 ECH